PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1221
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
BOERETT00031660 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00031663 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00031676 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00032189 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00032298 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00032308 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00035667 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00035972 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00037722 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00038491 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00038496 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00038498 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00038504 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00038510 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00038832 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00044413 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00047389 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00049769 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00049896 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00054272 Steroid BR6OX2/CYP85A2 medium borderline
BOERETT00055804 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00056051 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00056697 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00058815 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00058890 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00058906 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00058907 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00059486 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00059788 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00003471 Steroid CAS medium pass
BOERETT00003522 Steroid CAS medium pass
BOERETT00003523 Steroid CAS medium pass
BOERETT00003524 Steroid CAS medium pass
BOERETT00003525 Steroid CAS medium pass
BOERETT00003527 Steroid CAS low borderline
BOERETT00008642 Steroid CAS medium pass
BOERETT00013771 Steroid CAS medium pass
BOERETT00014004 Steroid CAS medium pass
BOERETT00017148 Steroid CAS low borderline
BOERETT00017150 Steroid CAS low borderline
BOERETT00017160 Steroid CAS low borderline
BOERETT00017165 Steroid CAS low borderline
BOERETT00017174 Steroid CAS low borderline
BOERETT00017177 Steroid CAS medium pass
BOERETT00026200 Steroid CAS medium pass
BOERETT00028479 Steroid CAS low borderline
BOERETT00028886 Steroid CAS medium pass
BOERETT00030299 Steroid CAS low borderline
BOERETT00034045 Steroid CAS low borderline
BOERETT00035989 Steroid CAS low borderline