PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1221
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
BOERETT00036802 Steroid CAS low borderline
BOERETT00036803 Steroid CAS low borderline
BOERETT00051320 Steroid CAS medium pass
BOERETT00051323 Steroid CAS medium pass
BOERETT00056715 Steroid CAS medium pass
BOERETT00057271 Steroid CAS medium pass
BOERETT00057664 Steroid CAS low borderline
BOERETT00058263 Steroid CAS medium pass
BOERETT00059212 Steroid CAS medium pass
BOERETT00059818 Steroid CAS medium pass
BOERETT00060007 Steroid CAS medium pass
BOERETT00060172 Steroid CAS medium pass
BOERETT00060176 Steroid CAS medium pass
BOERETT00060660 Steroid CAS low borderline
BOERETT00060821 Steroid CAS medium pass
BOERETT00012547 Steroid CPD/CYP90A1 low borderline
BOERETT00015656 Steroid CPD/CYP90A1 medium borderline
BOERETT00020902 Steroid CPD/CYP90A1 medium borderline
BOERETT00021587 Steroid CPD/CYP90A1 low borderline
BOERETT00026455 Steroid CPD/CYP90A1 medium borderline
BOERETT00026476 Steroid CPD/CYP90A1 medium borderline
BOERETT00026909 Steroid CPD/CYP90A1 low borderline
BOERETT00028532 Steroid CPD/CYP90A1 medium borderline
BOERETT00028839 Steroid CPD/CYP90A1 low borderline
BOERETT00029123 Steroid CPD/CYP90A1 medium borderline
BOERETT00030107 Steroid CPD/CYP90A1 medium borderline
BOERETT00034108 Steroid CPD/CYP90A1 low borderline
BOERETT00036233 Steroid CPD/CYP90A1 low borderline
BOERETT00037815 Steroid CPD/CYP90A1 low borderline
BOERETT00045107 Steroid CPD/CYP90A1 low borderline
BOERETT00045110 Steroid CPD/CYP90A1 medium borderline
BOERETT00051265 Steroid CPD/CYP90A1 low borderline
BOERETT00057340 Steroid CPI1 high pass
BOERETT00012637 Steroid CYP51G1 medium borderline
BOERETT00026853 Steroid CYP51G1 medium borderline
BOERETT00027537 Steroid CYP51G1 medium borderline
BOERETT00034137 Steroid CYP51G1 medium borderline
BOERETT00034138 Steroid CYP51G1 medium borderline
BOERETT00034140 Steroid CYP51G1 medium borderline
BOERETT00043927 Steroid CYP51G1 medium borderline
BOERETT00043928 Steroid CYP51G1 medium borderline
BOERETT00044987 Steroid CYP51G1 medium borderline
BOERETT00056116 Steroid CYP51G1 medium borderline
BOERETT00056121 Steroid CYP51G1 medium borderline
BOERETT00056122 Steroid CYP51G1 medium borderline
BOERETT00058123 Steroid CYP51G1 medium borderline
BOERETT00005303 Steroid CYP90D1 medium borderline
BOERETT00005867 Steroid CYP90D1 low borderline
BOERETT00006332 Steroid CYP90D1 low borderline
BOERETT00010673 Steroid CYP90D1 medium borderline