PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1221
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
BOERETT00010803 Steroid CYP90D1 low borderline
BOERETT00011935 Steroid CYP90D1 low borderline
BOERETT00020296 Steroid CYP90D1 medium borderline
BOERETT00023365 Steroid CYP90D1 medium borderline
BOERETT00023506 Steroid CYP90D1 low borderline
BOERETT00023507 Steroid CYP90D1 low borderline
BOERETT00025803 Steroid CYP90D1 low borderline
BOERETT00029203 Steroid CYP90D1 medium borderline
BOERETT00034302 Steroid CYP90D1 medium borderline
BOERETT00039124 Steroid CYP90D1 low borderline
BOERETT00039529 Steroid CYP90D1 low borderline
BOERETT00042185 Steroid CYP90D1 medium borderline
BOERETT00043596 Steroid CYP90D1 low borderline
BOERETT00044411 Steroid CYP90D1 low borderline
BOERETT00044468 Steroid CYP90D1 low borderline
BOERETT00045826 Steroid CYP90D1 low borderline
BOERETT00057673 Steroid CYP90D1 low borderline
BOERETT00037847 Steroid DET2 low borderline
BOERETT00038582 Steroid DET2 low borderline
BOERETT00052278 Steroid DET2 low borderline
BOERETT00053760 Steroid DET2 medium pass
BOERETT00061776 Steroid DET2 low borderline
BOERETT00029347 Steroid DWF1 low borderline
BOERETT00049741 Steroid DWF1 medium pass
BOERETT00003582 Steroid DWF4/CYP90B1 medium borderline
BOERETT00008663 Steroid DWF4/CYP90B1 low borderline
BOERETT00008810 Steroid DWF4/CYP90B1 low borderline
BOERETT00009261 Steroid DWF4/CYP90B1 low borderline
BOERETT00009816 Steroid DWF4/CYP90B1 medium borderline
BOERETT00009990 Steroid DWF4/CYP90B1 low borderline
BOERETT00010646 Steroid DWF4/CYP90B1 medium borderline
BOERETT00010648 Steroid DWF4/CYP90B1 medium borderline
BOERETT00011090 Steroid DWF4/CYP90B1 low borderline
BOERETT00011472 Steroid DWF4/CYP90B1 low borderline
BOERETT00012440 Steroid DWF4/CYP90B1 low borderline
BOERETT00012444 Steroid DWF4/CYP90B1 low borderline
BOERETT00012447 Steroid DWF4/CYP90B1 low borderline
BOERETT00012448 Steroid DWF4/CYP90B1 low borderline
BOERETT00012495 Steroid DWF4/CYP90B1 medium borderline
BOERETT00014658 Steroid DWF4/CYP90B1 medium borderline
BOERETT00014676 Steroid DWF4/CYP90B1 low borderline
BOERETT00017138 Steroid DWF4/CYP90B1 low borderline
BOERETT00017459 Steroid DWF4/CYP90B1 low borderline
BOERETT00017584 Steroid DWF4/CYP90B1 low borderline
BOERETT00017596 Steroid DWF4/CYP90B1 low borderline
BOERETT00017597 Steroid DWF4/CYP90B1 low borderline
BOERETT00017599 Steroid DWF4/CYP90B1 low borderline
BOERETT00017602 Steroid DWF4/CYP90B1 low borderline
BOERETT00017605 Steroid DWF4/CYP90B1 low borderline
BOERETT00017608 Steroid DWF4/CYP90B1 low borderline