PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1602
Candidate Protein Records
1221
Pathway-Level Records
3211
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
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Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BOERETT00055822 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00056051 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00056116 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00056121 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00056122 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00058815 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00058890 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00058906 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00058907 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00058979 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00059486 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00059788 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00060797 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00005303 Phenylpropanoid C4H/CYP73A medium borderline
BOERETT00010648 Phenylpropanoid C4H/CYP73A low borderline
BOERETT00017700 Phenylpropanoid C4H/CYP73A low borderline
BOERETT00054271 Phenylpropanoid C4H/CYP73A low borderline
BOERETT00000121 Phenylpropanoid CAD low borderline
BOERETT00000125 Phenylpropanoid CAD medium borderline
BOERETT00003471 Phenylpropanoid CAD low borderline
BOERETT00003755 Phenylpropanoid CAD low borderline
BOERETT00005805 Phenylpropanoid CAD low borderline
BOERETT00009736 Phenylpropanoid CAD medium pass
BOERETT00012951 Phenylpropanoid CAD medium borderline
BOERETT00012952 Phenylpropanoid CAD medium borderline
BOERETT00012953 Phenylpropanoid CAD medium borderline
BOERETT00017150 Phenylpropanoid CAD low borderline
BOERETT00017160 Phenylpropanoid CAD low borderline
BOERETT00017177 Phenylpropanoid CAD low borderline
BOERETT00021303 Phenylpropanoid CAD medium pass
BOERETT00022221 Phenylpropanoid CAD low borderline
BOERETT00026885 Phenylpropanoid CAD medium pass
BOERETT00028479 Phenylpropanoid CAD low borderline
BOERETT00030299 Phenylpropanoid CAD low borderline
BOERETT00030414 Phenylpropanoid CAD low borderline
BOERETT00032097 Phenylpropanoid CAD low borderline
BOERETT00034045 Phenylpropanoid CAD low borderline
BOERETT00035989 Phenylpropanoid CAD low borderline
BOERETT00036258 Phenylpropanoid CAD low borderline
BOERETT00036802 Phenylpropanoid CAD low borderline
BOERETT00036803 Phenylpropanoid CAD low borderline
BOERETT00038381 Phenylpropanoid CAD medium pass
BOERETT00040615 Phenylpropanoid CAD low borderline
BOERETT00042448 Phenylpropanoid CAD low borderline
BOERETT00044002 Phenylpropanoid CAD medium pass
BOERETT00044003 Phenylpropanoid CAD medium pass
BOERETT00044004 Phenylpropanoid CAD medium pass
BOERETT00044740 Phenylpropanoid CAD medium pass
BOERETT00045760 Phenylpropanoid CAD medium borderline
BOERETT00049688 Phenylpropanoid CAD medium pass