PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1602
Candidate Protein Records
1221
Pathway-Level Records
3211
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
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Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BOERETT00044861 Phenylpropanoid COMT low borderline
BOERETT00044867 Phenylpropanoid COMT low borderline
BOERETT00045819 Phenylpropanoid COMT medium pass
BOERETT00045836 Phenylpropanoid COMT medium pass
BOERETT00049763 Phenylpropanoid COMT low borderline
BOERETT00054672 Phenylpropanoid COMT low borderline
BOERETT00057433 Phenylpropanoid COMT medium pass
BOERETT00003721 Phenylpropanoid CSE medium pass
BOERETT00005442 Phenylpropanoid CSE medium pass
BOERETT00006571 Phenylpropanoid CSE medium pass
BOERETT00008518 Phenylpropanoid CSE medium pass
BOERETT00012735 Phenylpropanoid CSE medium pass
BOERETT00012909 Phenylpropanoid CSE medium pass
BOERETT00013341 Phenylpropanoid CSE medium pass
BOERETT00013597 Phenylpropanoid CSE medium pass
BOERETT00020816 Phenylpropanoid CSE medium pass
BOERETT00024062 Phenylpropanoid CSE medium pass
BOERETT00025720 Phenylpropanoid CSE medium pass
BOERETT00026861 Phenylpropanoid CSE medium pass
BOERETT00029086 Phenylpropanoid CSE medium pass
BOERETT00029087 Phenylpropanoid CSE medium pass
BOERETT00029256 Phenylpropanoid CSE medium pass
BOERETT00034014 Phenylpropanoid CSE medium pass
BOERETT00034132 Phenylpropanoid CSE medium pass
BOERETT00034133 Phenylpropanoid CSE medium pass
BOERETT00035860 Phenylpropanoid CSE medium pass
BOERETT00037011 Phenylpropanoid CSE medium pass
BOERETT00037014 Phenylpropanoid CSE medium pass
BOERETT00038311 Phenylpropanoid CSE medium pass
BOERETT00038922 Phenylpropanoid CSE medium pass
BOERETT00040603 Phenylpropanoid CSE low borderline
BOERETT00040833 Phenylpropanoid CSE medium pass
BOERETT00041719 Phenylpropanoid CSE medium pass
BOERETT00044884 Phenylpropanoid CSE medium pass
BOERETT00045095 Phenylpropanoid CSE medium pass
BOERETT00045272 Phenylpropanoid CSE medium pass
BOERETT00047264 Phenylpropanoid CSE medium pass
BOERETT00047265 Phenylpropanoid CSE medium pass
BOERETT00049683 Phenylpropanoid CSE medium pass
BOERETT00049684 Phenylpropanoid CSE medium pass
BOERETT00052227 Phenylpropanoid CSE medium pass
BOERETT00057365 Phenylpropanoid CSE medium pass
BOERETT00061791 Phenylpropanoid CSE medium pass
BOERETT00006332 Phenylpropanoid F5H/CYP84A medium borderline
BOERETT00009935 Phenylpropanoid F5H/CYP84A medium borderline
BOERETT00012637 Phenylpropanoid F5H/CYP84A medium borderline
BOERETT00013821 Phenylpropanoid F5H/CYP84A medium borderline
BOERETT00016465 Phenylpropanoid F5H/CYP84A medium borderline
BOERETT00025556 Phenylpropanoid F5H/CYP84A medium borderline
BOERETT00026476 Phenylpropanoid F5H/CYP84A medium borderline