PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1221
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
BOERETT00001760 Alkaloid BBE medium borderline
BOERETT00001762 Alkaloid BBE medium borderline
BOERETT00005985 Alkaloid BBE medium borderline
BOERETT00005989 Alkaloid BBE medium borderline
BOERETT00005990 Alkaloid BBE medium borderline
BOERETT00005991 Alkaloid BBE medium borderline
BOERETT00012622 Alkaloid BBE medium borderline
BOERETT00038057 Alkaloid BBE medium borderline
BOERETT00038064 Alkaloid BBE medium borderline
BOERETT00038068 Alkaloid BBE medium borderline
BOERETT00038069 Alkaloid BBE medium borderline
BOERETT00038070 Alkaloid BBE medium borderline
BOERETT00038072 Alkaloid BBE medium borderline
BOERETT00042057 Alkaloid BBE medium borderline
BOERETT00042352 Alkaloid BBE medium borderline
BOERETT00042353 Alkaloid BBE medium borderline
BOERETT00042354 Alkaloid BBE medium borderline
BOERETT00042361 Alkaloid BBE medium borderline
BOERETT00042365 Alkaloid BBE medium borderline
BOERETT00042367 Alkaloid BBE medium borderline
BOERETT00045138 Alkaloid BBE low borderline
BOERETT00054229 Alkaloid BBE medium borderline
BOERETT00054234 Alkaloid BBE medium borderline
BOERETT00008671 Alkaloid CNMT low borderline
BOERETT00009263 Alkaloid CNMT low borderline
BOERETT00012335 Alkaloid CNMT low borderline
BOERETT00020028 Alkaloid CNMT low borderline
BOERETT00022891 Alkaloid CNMT low borderline
BOERETT00031831 Alkaloid CNMT low borderline
BOERETT00041168 Alkaloid CNMT low borderline
BOERETT00044606 Alkaloid CNMT medium borderline
BOERETT00056144 Alkaloid CNMT low borderline
BOERETT00061484 Alkaloid CNMT low borderline
BOERETT00003347 Alkaloid CODM/T6ODM medium borderline
BOERETT00003348 Alkaloid CODM/T6ODM medium borderline
BOERETT00003574 Alkaloid CODM/T6ODM medium borderline
BOERETT00003586 Alkaloid CODM/T6ODM medium borderline
BOERETT00003732 Alkaloid CODM/T6ODM medium borderline
BOERETT00004109 Alkaloid CODM/T6ODM medium borderline
BOERETT00004155 Alkaloid CODM/T6ODM medium borderline
BOERETT00006846 Alkaloid CODM/T6ODM medium borderline
BOERETT00013305 Alkaloid CODM/T6ODM medium borderline
BOERETT00013306 Alkaloid CODM/T6ODM medium borderline
BOERETT00013509 Alkaloid CODM/T6ODM medium borderline
BOERETT00018873 Alkaloid CODM/T6ODM medium borderline
BOERETT00018874 Alkaloid CODM/T6ODM medium borderline
BOERETT00020313 Alkaloid CODM/T6ODM medium borderline
BOERETT00020319 Alkaloid CODM/T6ODM medium borderline
BOERETT00020321 Alkaloid CODM/T6ODM medium borderline
BOERETT00020435 Alkaloid CODM/T6ODM medium borderline