PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

/

Imported from atlas release summary for Boechera retrofracta.

1221
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Gene Pathway Family Confidence Status
BOERETT00023356 Alkaloid CODM/T6ODM medium borderline
BOERETT00023543 Alkaloid CODM/T6ODM medium borderline
BOERETT00023587 Alkaloid CODM/T6ODM medium borderline
BOERETT00024136 Alkaloid CODM/T6ODM medium borderline
BOERETT00025066 Alkaloid CODM/T6ODM medium borderline
BOERETT00026075 Alkaloid CODM/T6ODM medium borderline
BOERETT00032150 Alkaloid CODM/T6ODM medium borderline
BOERETT00032364 Alkaloid CODM/T6ODM medium borderline
BOERETT00032980 Alkaloid CODM/T6ODM low borderline
BOERETT00032984 Alkaloid CODM/T6ODM medium borderline
BOERETT00033917 Alkaloid CODM/T6ODM medium borderline
BOERETT00033987 Alkaloid CODM/T6ODM medium borderline
BOERETT00035008 Alkaloid CODM/T6ODM medium borderline
BOERETT00035755 Alkaloid CODM/T6ODM medium borderline
BOERETT00035760 Alkaloid CODM/T6ODM medium borderline
BOERETT00035765 Alkaloid CODM/T6ODM medium borderline
BOERETT00036079 Alkaloid CODM/T6ODM medium borderline
BOERETT00036253 Alkaloid CODM/T6ODM medium borderline
BOERETT00037563 Alkaloid CODM/T6ODM medium borderline
BOERETT00037714 Alkaloid CODM/T6ODM medium borderline
BOERETT00037715 Alkaloid CODM/T6ODM medium borderline
BOERETT00037718 Alkaloid CODM/T6ODM medium borderline
BOERETT00040390 Alkaloid CODM/T6ODM medium borderline
BOERETT00041738 Alkaloid CODM/T6ODM medium borderline
BOERETT00041819 Alkaloid CODM/T6ODM medium borderline
BOERETT00041823 Alkaloid CODM/T6ODM medium borderline
BOERETT00043607 Alkaloid CODM/T6ODM medium borderline
BOERETT00043955 Alkaloid CODM/T6ODM medium borderline
BOERETT00045502 Alkaloid CODM/T6ODM medium borderline
BOERETT00045505 Alkaloid CODM/T6ODM medium borderline
BOERETT00045506 Alkaloid CODM/T6ODM medium borderline
BOERETT00045522 Alkaloid CODM/T6ODM medium borderline
BOERETT00049589 Alkaloid CODM/T6ODM medium borderline
BOERETT00049590 Alkaloid CODM/T6ODM medium borderline
BOERETT00053741 Alkaloid CODM/T6ODM medium borderline
BOERETT00053969 Alkaloid CODM/T6ODM medium borderline
BOERETT00054265 Alkaloid CODM/T6ODM medium borderline
BOERETT00056136 Alkaloid CODM/T6ODM medium borderline
BOERETT00056464 Alkaloid CODM/T6ODM medium borderline
BOERETT00058052 Alkaloid CODM/T6ODM medium borderline
BOERETT00061108 Alkaloid CODM/T6ODM medium borderline
BOERETT00061109 Alkaloid CODM/T6ODM low borderline
BOERETT00061111 Alkaloid CODM/T6ODM medium borderline
BOERETT00000829 Alkaloid COR medium pass
BOERETT00000842 Alkaloid COR medium pass
BOERETT00021205 Alkaloid COR medium pass
BOERETT00022871 Alkaloid COR medium pass
BOERETT00026550 Alkaloid COR medium pass
BOERETT00036114 Alkaloid COR medium pass
BOERETT00053805 Alkaloid COR medium pass