PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1221
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
BOERETT00053807 Alkaloid COR medium pass
BOERETT00053809 Alkaloid COR medium pass
BOERETT00009261 Alkaloid CYP719 medium borderline
BOERETT00023255 Alkaloid CYP719 low borderline
BOERETT00025983 Alkaloid CYP719 medium borderline
BOERETT00028492 Alkaloid CYP719 low borderline
BOERETT00030107 Alkaloid CYP719 medium borderline
BOERETT00038910 Alkaloid CYP719 low borderline
BOERETT00041287 Alkaloid CYP719 medium borderline
BOERETT00041304 Alkaloid CYP719 medium borderline
BOERETT00054271 Alkaloid CYP719 medium borderline
BOERETT00017459 Alkaloid CYP80B1 medium borderline
BOERETT00031652 Alkaloid CYP80B1 medium borderline
BOERETT00031660 Alkaloid CYP80B1 medium borderline
BOERETT00031663 Alkaloid CYP80B1 medium borderline
BOERETT00006131 Alkaloid CYP80F1 medium borderline
BOERETT00012438 Alkaloid CYP80F1 medium borderline
BOERETT00012440 Alkaloid CYP80F1 medium borderline
BOERETT00028522 Alkaloid CYP80F1 medium borderline
BOERETT00050112 Alkaloid CYP80F1 medium borderline
BOERETT00058979 Alkaloid CYP80F1 medium borderline
BOERETT00008663 Alkaloid G8O/G8H medium borderline
BOERETT00009990 Alkaloid G8O/G8H medium borderline
BOERETT00013821 Alkaloid G8O/G8H medium borderline
BOERETT00013822 Alkaloid G8O/G8H low borderline
BOERETT00016453 Alkaloid G8O/G8H medium borderline
BOERETT00017597 Alkaloid G8O/G8H medium borderline
BOERETT00023941 Alkaloid G8O/G8H medium borderline
BOERETT00025839 Alkaloid G8O/G8H medium borderline
BOERETT00028838 Alkaloid G8O/G8H medium borderline
BOERETT00028839 Alkaloid G8O/G8H medium borderline
BOERETT00031676 Alkaloid G8O/G8H medium borderline
BOERETT00034140 Alkaloid G8O/G8H medium pass
BOERETT00035466 Alkaloid G8O/G8H medium borderline
BOERETT00038504 Alkaloid G8O/G8H medium borderline
BOERETT00044411 Alkaloid G8O/G8H medium borderline
BOERETT00044413 Alkaloid G8O/G8H medium borderline
BOERETT00045108 Alkaloid G8O/G8H medium borderline
BOERETT00000121 Alkaloid GES medium pass
BOERETT00001704 Alkaloid GES medium pass
BOERETT00003471 Alkaloid GES low borderline
BOERETT00017148 Alkaloid GES medium pass
BOERETT00017150 Alkaloid GES medium pass
BOERETT00017160 Alkaloid GES low borderline
BOERETT00017164 Alkaloid GES low borderline
BOERETT00017165 Alkaloid GES low borderline
BOERETT00017174 Alkaloid GES low borderline
BOERETT00017176 Alkaloid GES medium pass
BOERETT00017177 Alkaloid GES medium pass
BOERETT00020174 Alkaloid GES medium pass