PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1602
Candidate Protein Records
1221
Pathway-Level Records
3211
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BOERETT00006147 Rosmarinic Acid TAT medium pass
BOERETT00011333 Rosmarinic Acid TAT medium pass
BOERETT00017337 Rosmarinic Acid TAT medium pass
BOERETT00017338 Rosmarinic Acid TAT medium pass
BOERETT00021382 Rosmarinic Acid TAT low borderline
BOERETT00022920 Rosmarinic Acid TAT low borderline
BOERETT00026521 Rosmarinic Acid TAT medium pass
BOERETT00028001 Rosmarinic Acid TAT medium pass
BOERETT00028510 Rosmarinic Acid TAT medium pass
BOERETT00028881 Rosmarinic Acid TAT medium pass
BOERETT00030118 Rosmarinic Acid TAT medium pass
BOERETT00035005 Rosmarinic Acid TAT medium pass
BOERETT00037942 Rosmarinic Acid TAT low borderline
BOERETT00045284 Rosmarinic Acid TAT medium pass
BOERETT00045285 Rosmarinic Acid TAT medium pass
BOERETT00045924 Rosmarinic Acid TAT medium pass
BOERETT00045925 Rosmarinic Acid TAT medium pass
BOERETT00047187 Rosmarinic Acid TAT low borderline
BOERETT00010802 Steroid BR6OX1/CYP85A1 medium borderline
BOERETT00011341 Steroid BR6OX1/CYP85A1 medium borderline
BOERETT00013491 Steroid BR6OX1/CYP85A1 medium borderline
BOERETT00029138 Steroid BR6OX1/CYP85A1 low borderline
BOERETT00037383 Steroid BR6OX1/CYP85A1 medium borderline
BOERETT00043282 Steroid BR6OX1/CYP85A1 medium borderline
BOERETT00055822 Steroid BR6OX1/CYP85A1 medium borderline
BOERETT00000704 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00001728 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00001729 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00004637 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00006131 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00009935 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00009991 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00010057 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00012349 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00012438 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00012443 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00012652 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00013707 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00013821 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00015655 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00016465 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00019136 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00019145 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00019185 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00021321 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00023250 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00023684 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00023851 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00025839 Steroid BR6OX2/CYP85A2 low borderline
BOERETT00025923 Steroid BR6OX2/CYP85A2 low borderline