PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1602
Candidate Protein Records
1221
Pathway-Level Records
3211
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BOERETT00024270 Steroid SMT1/SMT2/SMT3 medium pass
BOERETT00028492 Steroid SMT1/SMT2/SMT3 medium pass
BOERETT00029210 Steroid SMT1/SMT2/SMT3 low borderline
BOERETT00032489 Steroid SMT1/SMT2/SMT3 low borderline
BOERETT00032493 Steroid SMT1/SMT2/SMT3 low borderline
BOERETT00033707 Steroid SMT1/SMT2/SMT3 low borderline
BOERETT00033708 Steroid SMT1/SMT2/SMT3 medium pass
BOERETT00033709 Steroid SMT1/SMT2/SMT3 low borderline
BOERETT00033710 Steroid SMT1/SMT2/SMT3 medium pass
BOERETT00036800 Steroid SMT1/SMT2/SMT3 medium pass
BOERETT00036801 Steroid SMT1/SMT2/SMT3 low borderline
BOERETT00037495 Steroid SMT1/SMT2/SMT3 low borderline
BOERETT00041168 Steroid SMT1/SMT2/SMT3 medium pass
BOERETT00044305 Steroid SMT1/SMT2/SMT3 medium pass
BOERETT00044328 Steroid SMT1/SMT2/SMT3 medium pass
BOERETT00048147 Steroid SMT1/SMT2/SMT3 medium pass
BOERETT00048724 Steroid SMT1/SMT2/SMT3 low borderline
BOERETT00049350 Steroid SMT1/SMT2/SMT3 medium pass
BOERETT00049451 Steroid SMT1/SMT2/SMT3 low borderline
BOERETT00054091 Steroid SMT1/SMT2/SMT3 medium pass
BOERETT00054092 Steroid SMT1/SMT2/SMT3 low borderline
BOERETT00054384 Steroid SMT1/SMT2/SMT3 medium pass
BOERETT00054528 Steroid SMT1/SMT2/SMT3 medium pass
BOERETT00054661 Steroid SMT1/SMT2/SMT3 low borderline
BOERETT00054687 Steroid SMT1/SMT2/SMT3 medium pass
BOERETT00055743 Steroid SMT1/SMT2/SMT3 low borderline
BOERETT00056370 Steroid SMT1/SMT2/SMT3 medium pass
BOERETT00058607 Steroid SMT1/SMT2/SMT3 medium pass
BOERETT00059514 Steroid SMT1/SMT2/SMT3 low borderline
BOERETT00059612 Steroid SMT1/SMT2/SMT3 low borderline
BOERETT00060795 Steroid SMT1/SMT2/SMT3 medium pass
BOERETT00060839 Steroid SMT1/SMT2/SMT3 low borderline
BOERETT00061854 Steroid SMT1/SMT2/SMT3 low borderline
BOERETT00010946 Steroid SQE medium pass
BOERETT00021502 Steroid SQE medium pass
BOERETT00033404 Steroid SQE medium pass
BOERETT00043978 Steroid SQE medium pass
BOERETT00060620 Steroid SQE medium pass
BOERETT00060624 Steroid SQE medium pass
BOERETT00060626 Steroid SQE medium pass
BOERETT00060628 Steroid SQE medium pass
BOERETT00017335 Steroid SQS/FDFT1 low borderline
BOERETT00032711 Steroid SQS/FDFT1 low borderline
BOERETT00044803 Steroid SQS/FDFT1 high pass
BOERETT00044804 Steroid SQS/FDFT1 high pass
BOERETT00061588 Steroid SQS/FDFT1 medium pass