PlantSME Plant secondary metabolism enzyme database

Carthamus tinctorius (carthamus_tinctorius)

Imported from atlas release summary for Carthamus tinctorius.

2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 627 19 BAHD (246) View species results
Alkaloid pathway 446 22 7DLGT (95) View species results
Phenylpropanoid pathway 394 11 POD (168) View species results
Flavonoid pathway 257 12 UFGT (170) View species results
Rosmarinic acid pathway 163 7 C4H (62) View species results
Steroid pathway 134 12 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1990 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 421 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Ctin03G0019200.1 Alkaloid 7DLGT medium pass
Ctin03G0019210.1 Alkaloid 7DLGT low borderline
Ctin03G0019240.1 Alkaloid 7DLGT low borderline
Ctin03G0019280.1 Alkaloid 7DLGT low borderline
Ctin03G0019290.1 Alkaloid 7DLGT medium pass
Ctin03G0019300.1 Alkaloid 7DLGT low borderline
Ctin03G0019340.1 Alkaloid 7DLGT medium pass
Ctin03G0019350.1 Alkaloid 7DLGT medium pass
Ctin03G0022180.1 Alkaloid 7DLGT medium pass
Ctin03G0022200.1 Alkaloid 7DLGT low borderline
Ctin03G0022200.2 Alkaloid 7DLGT medium pass
Ctin03G0022200.3 Alkaloid 7DLGT medium pass
Ctin03G0022200.4 Alkaloid 7DLGT medium pass
Ctin03G0030380.1 Alkaloid 7DLGT medium pass
Ctin03G0030390.1 Alkaloid 7DLGT medium pass
Ctin03G0030430.1 Alkaloid 7DLGT low borderline
Ctin04G0000190.1 Alkaloid 7DLGT low borderline
Ctin04G0001730.1 Alkaloid 7DLGT high pass
Ctin04G0011200.2 Alkaloid 7DLGT low borderline
Ctin04G0018550.1 Alkaloid 7DLGT low borderline
Ctin05G0009210.1 Alkaloid 7DLGT low borderline
Ctin05G0009340.1 Alkaloid 7DLGT low borderline
Ctin05G0009350.1 Alkaloid 7DLGT low borderline
Ctin05G0018140.1 Alkaloid 7DLGT medium pass
Ctin06G0002260.1 Alkaloid 7DLGT low borderline
Ctin06G0002270.1 Alkaloid 7DLGT low borderline
Ctin06G0002280.1 Alkaloid 7DLGT low borderline
Ctin06G0002290.1 Alkaloid 7DLGT low borderline
Ctin06G0002300.1 Alkaloid 7DLGT low borderline
Ctin06G0002440.3 Alkaloid 7DLGT low borderline
Ctin06G0002450.1 Alkaloid 7DLGT low borderline
Ctin06G0002460.1 Alkaloid 7DLGT medium pass
Ctin06G0002470.1 Alkaloid 7DLGT low borderline
Ctin06G0002480.1 Alkaloid 7DLGT low borderline
Ctin06G0002490.1 Alkaloid 7DLGT low borderline
Ctin06G0002500.1 Alkaloid 7DLGT low borderline
Ctin06G0007220.1 Alkaloid 7DLGT low borderline
Ctin06G0010070.1 Alkaloid 7DLGT low borderline
Ctin06G0010150.1 Alkaloid 7DLGT low borderline
Ctin06G0016820.1 Alkaloid 7DLGT medium pass
Ctin06G0016830.1 Alkaloid 7DLGT low borderline
Ctin06G0028530.1 Alkaloid 7DLGT low borderline
Ctin06G0028540.1 Alkaloid 7DLGT low borderline
Ctin06G0028780.1 Alkaloid 7DLGT high pass
Ctin06G0028800.1 Alkaloid 7DLGT low borderline
Ctin06G0028800.2 Alkaloid 7DLGT high pass
Ctin06G0028810.1 Alkaloid 7DLGT medium pass
Ctin06G0028830.1 Alkaloid 7DLGT medium pass
Ctin06G0031250.1 Alkaloid 7DLGT low borderline
Ctin06G0032650.1 Alkaloid 7DLGT medium pass