PlantSME Plant secondary metabolism enzyme database

Carthamus tinctorius (carthamus_tinctorius)

Imported from atlas release summary for Carthamus tinctorius.

2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 627 19 BAHD (246) View species results
Alkaloid pathway 446 22 7DLGT (95) View species results
Phenylpropanoid pathway 394 11 POD (168) View species results
Flavonoid pathway 257 12 UFGT (170) View species results
Rosmarinic acid pathway 163 7 C4H (62) View species results
Steroid pathway 134 12 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1990 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 421 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Ctin06G0032660.1 Alkaloid 7DLGT medium pass
Ctin06G0032660.2 Alkaloid 7DLGT medium pass
Ctin06G0032660.3 Alkaloid 7DLGT medium pass
Ctin06G0032660.4 Alkaloid 7DLGT medium pass
Ctin06G0032660.5 Alkaloid 7DLGT high pass
Ctin07G0007180.1 Alkaloid 7DLGT low borderline
Ctin07G0007200.1 Alkaloid 7DLGT low borderline
Ctin07G0011840.1 Alkaloid 7DLGT medium pass
Ctin07G0011840.2 Alkaloid 7DLGT medium pass
Ctin07G0011860.1 Alkaloid 7DLGT medium pass
Ctin07G0011880.1 Alkaloid 7DLGT medium pass
Ctin07G0025190.1 Alkaloid 7DLGT low borderline
Ctin08G0000820.1 Alkaloid 7DLGT low borderline
Ctin08G0004810.1 Alkaloid 7DLGT high pass
Ctin08G0004820.1 Alkaloid 7DLGT medium pass
Ctin08G0004840.1 Alkaloid 7DLGT high pass
Ctin08G0004850.1 Alkaloid 7DLGT medium pass
Ctin08G0004860.1 Alkaloid 7DLGT medium pass
Ctin08G0004870.1 Alkaloid 7DLGT low borderline
Ctin08G0004870.2 Alkaloid 7DLGT low borderline
Ctin08G0004880.1 Alkaloid 7DLGT medium pass
Ctin08G0004900.1 Alkaloid 7DLGT low borderline
Ctin08G0004900.2 Alkaloid 7DLGT medium pass
Ctin08G0004900.3 Alkaloid 7DLGT low borderline
Ctin08G0009100.1 Alkaloid 7DLGT high pass
Ctin08G0009110.1 Alkaloid 7DLGT medium pass
Ctin08G0010460.1 Alkaloid 7DLGT low borderline
Ctin08G0012720.1 Alkaloid 7DLGT medium pass
Ctin08G0013560.1 Alkaloid 7DLGT low borderline
Ctin08G0013560.2 Alkaloid 7DLGT low borderline
Ctin08G0013570.1 Alkaloid 7DLGT medium pass
Ctin08G0013570.2 Alkaloid 7DLGT medium pass
Ctin08G0014920.1 Alkaloid 7DLGT low borderline
Ctin08G0014930.1 Alkaloid 7DLGT medium pass
Ctin08G0014940.1 Alkaloid 7DLGT low borderline
Ctin08G0015730.1 Alkaloid 7DLGT medium pass
Ctin08G0015740.1 Alkaloid 7DLGT medium pass
Ctin08G0018390.1 Alkaloid 7DLGT low borderline
Ctin08G0018400.1 Alkaloid 7DLGT low borderline
Ctin08G0018410.1 Alkaloid 7DLGT low borderline
Ctin08G0018420.1 Alkaloid 7DLGT low borderline
Ctin08G0019080.1 Alkaloid 7DLGT medium pass
Ctin08G0019300.1 Alkaloid 7DLGT low borderline
Ctin08G0021090.1 Alkaloid 7DLGT medium pass
Ctin08G0023240.1 Alkaloid 7DLGT medium pass
Ctin08G0023330.1 Alkaloid 7DLGT medium pass
Ctin08G0023350.1 Alkaloid 7DLGT low borderline
Ctin08G0023360.1 Alkaloid 7DLGT low borderline
Ctin08G0023380.1 Alkaloid 7DLGT low borderline
Ctin09G0010150.1 Alkaloid 7DLGT medium pass