PlantSME Plant secondary metabolism enzyme database

Carthamus tinctorius (carthamus_tinctorius)

Imported from atlas release summary for Carthamus tinctorius.

2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 627 19 BAHD (246) View species results
Alkaloid pathway 446 22 7DLGT (95) View species results
Phenylpropanoid pathway 394 11 POD (168) View species results
Flavonoid pathway 257 12 UFGT (170) View species results
Rosmarinic acid pathway 163 7 C4H (62) View species results
Steroid pathway 134 12 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1990 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 421 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Gene Pathway Family Confidence Status
Ctin08G0033630.1 Flavonoid 4CL medium pass
Ctin09G0002010.1 Flavonoid 4CL low borderline
Ctin09G0003570.1 Flavonoid 4CL medium pass
Ctin09G0004650.1 Flavonoid 4CL medium pass
Ctin09G0013410.1 Flavonoid 4CL medium pass
Ctin09G0022380.1 Flavonoid 4CL low borderline
Ctin10G0010470.1 Flavonoid 4CL low borderline
Ctin10G0010470.2 Flavonoid 4CL low borderline
Ctin10G0010470.3 Flavonoid 4CL low borderline
Ctin10G0022190.1 Flavonoid 4CL medium pass
Ctin11G0009290.1 Flavonoid 4CL medium pass
Ctin11G0016090.1 Flavonoid 4CL low borderline
Ctin11G0016610.1 Flavonoid 4CL medium pass
Ctin11G0016610.2 Flavonoid 4CL medium pass
Ctin11G0016610.3 Flavonoid 4CL medium pass
Ctin11G0016620.1 Flavonoid 4CL medium pass
Ctin11G0016630.1 Flavonoid 4CL medium pass
Ctin11G0016630.2 Flavonoid 4CL medium pass
Ctin11G0016630.3 Flavonoid 4CL medium pass
Ctin11G0024510.1 Flavonoid 4CL low borderline
Ctin12G0000800.1 Flavonoid 4CL medium pass
Ctin12G0001210.1 Flavonoid 4CL medium pass
Ctin12G0001220.1 Flavonoid 4CL low borderline
Ctin12G0001270.1 Flavonoid 4CL medium pass
Ctin12G0003350.1 Flavonoid 4CL medium pass
Ctin01G0000890.1 Flavonoid ANR low borderline
Ctin02G0011440.1 Flavonoid ANR medium borderline
Ctin02G0015550.1 Flavonoid ANR medium borderline
Ctin03G0027310.1 Flavonoid ANR low borderline
Ctin04G0019660.1 Flavonoid ANR medium borderline
Ctin04G0019660.2 Flavonoid ANR medium borderline
Ctin04G0019680.1 Flavonoid ANR medium borderline
Ctin04G0019680.2 Flavonoid ANR medium borderline
Ctin04G0019690.1 Flavonoid ANR medium borderline
Ctin04G0019700.1 Flavonoid ANR medium borderline
Ctin06G0018460.1 Flavonoid ANR medium borderline
Ctin06G0018470.1 Flavonoid ANR medium borderline
Ctin06G0021020.1 Flavonoid ANR medium borderline
Ctin06G0021040.1 Flavonoid ANR high pass
Ctin06G0021040.2 Flavonoid ANR medium borderline
Ctin07G0008300.1 Flavonoid ANR medium borderline
Ctin07G0024840.1 Flavonoid ANR medium borderline
Ctin08G0016070.1 Flavonoid ANR medium borderline
Ctin08G0025400.1 Flavonoid ANR medium borderline
Ctin08G0026210.1 Flavonoid ANR medium borderline
Ctin08G0026220.1 Flavonoid ANR medium borderline
Ctin08G0033210.1 Flavonoid ANR medium pass
Ctin09G0029150.1 Flavonoid ANR medium borderline
Ctin10G0006500.1 Flavonoid ANR medium borderline
Ctin10G0023390.1 Flavonoid ANR low borderline