PlantSME Plant secondary metabolism enzyme database

Carthamus tinctorius (carthamus_tinctorius)

Imported from atlas release summary for Carthamus tinctorius.

2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 627 19 BAHD (246) View species results
Alkaloid pathway 446 22 7DLGT (95) View species results
Phenylpropanoid pathway 394 11 POD (168) View species results
Flavonoid pathway 257 12 UFGT (170) View species results
Rosmarinic acid pathway 163 7 C4H (62) View species results
Steroid pathway 134 12 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1990 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 421 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Ctin10G0023390.2 Flavonoid ANR low borderline
Ctin10G0023390.3 Flavonoid ANR low borderline
Ctin10G0023390.4 Flavonoid ANR low borderline
Ctin11G0020480.1 Flavonoid ANR medium borderline
Ctin01G0009670.1 Flavonoid ANS/LDOX medium borderline
Ctin01G0009920.1 Flavonoid ANS/LDOX medium borderline
Ctin01G0009920.2 Flavonoid ANS/LDOX medium borderline
Ctin01G0019120.1 Flavonoid ANS/LDOX medium borderline
Ctin01G0022940.1 Flavonoid ANS/LDOX medium borderline
Ctin03G0003840.2 Flavonoid ANS/LDOX medium borderline
Ctin03G0018770.1 Flavonoid ANS/LDOX medium borderline
Ctin03G0018800.1 Flavonoid ANS/LDOX medium pass
Ctin03G0018840.1 Flavonoid ANS/LDOX medium borderline
Ctin03G0028030.1 Flavonoid ANS/LDOX medium borderline
Ctin04G0023410.1 Flavonoid ANS/LDOX medium borderline
Ctin05G0011080.3 Flavonoid ANS/LDOX medium borderline
Ctin06G0000110.1 Flavonoid ANS/LDOX medium borderline
Ctin06G0012310.1 Flavonoid ANS/LDOX medium borderline
Ctin06G0017030.2 Flavonoid ANS/LDOX medium borderline
Ctin06G0020330.1 Flavonoid ANS/LDOX medium borderline
Ctin07G0023500.1 Flavonoid ANS/LDOX medium borderline
Ctin10G0022100.1 Flavonoid ANS/LDOX medium borderline
Ctin01G0020190.1 Flavonoid C4H low borderline
Ctin02G0000730.1 Flavonoid C4H low borderline
Ctin03G0007790.1 Flavonoid C4H low borderline
Ctin03G0028370.1 Flavonoid C4H low borderline
Ctin07G0005890.1 Flavonoid C4H medium borderline
Ctin08G0007870.1 Flavonoid C4H medium borderline
Ctin09G0007580.2 Flavonoid C4H low borderline
Ctin09G0019390.1 Flavonoid C4H low borderline
Ctin09G0026680.1 Flavonoid C4H medium borderline
Ctin12G0010300.1 Flavonoid C4H medium borderline
Ctin07G0012820.1 Flavonoid CHI medium pass
Ctin10G0009130.1 Flavonoid CHI medium pass
Ctin10G0020050.1 Flavonoid CHI medium pass
Ctin10G0020060.1 Flavonoid CHI medium pass
Ctin01G0004710.1 Flavonoid CHS medium pass
Ctin01G0004710.2 Flavonoid CHS medium pass
Ctin02G0010850.1 Flavonoid CHS medium pass
Ctin03G0016960.1 Flavonoid CHS medium pass
Ctin08G0015760.1 Flavonoid CHS medium pass
Ctin08G0015820.1 Flavonoid CHS medium pass
Ctin08G0015830.1 Flavonoid CHS medium pass
Ctin08G0024040.1 Flavonoid CHS medium pass
Ctin03G0017980.1 Flavonoid DFR low borderline
Ctin06G0018490.1 Flavonoid DFR low borderline
Ctin06G0018500.1 Flavonoid DFR medium pass
Ctin06G0021000.1 Flavonoid DFR medium borderline
Ctin06G0021010.1 Flavonoid DFR medium borderline
Ctin07G0008160.1 Flavonoid DFR medium borderline