PlantSME Plant secondary metabolism enzyme database

Carthamus tinctorius (carthamus_tinctorius)

Imported from atlas release summary for Carthamus tinctorius.

2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 627 19 BAHD (246) View species results
Alkaloid pathway 446 22 7DLGT (95) View species results
Phenylpropanoid pathway 394 11 POD (168) View species results
Flavonoid pathway 257 12 UFGT (170) View species results
Rosmarinic acid pathway 163 7 C4H (62) View species results
Steroid pathway 134 12 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1990 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 421 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
Reset
Gene Pathway Family Confidence Status
Ctin08G0011640.2 Rosmarinic Acid 4CL low borderline
Ctin08G0011640.3 Rosmarinic Acid 4CL low borderline
Ctin08G0017720.1 Rosmarinic Acid 4CL medium pass
Ctin08G0017730.1 Rosmarinic Acid 4CL medium pass
Ctin08G0033630.1 Rosmarinic Acid 4CL medium pass
Ctin09G0002010.1 Rosmarinic Acid 4CL low borderline
Ctin09G0003570.1 Rosmarinic Acid 4CL medium pass
Ctin09G0004650.1 Rosmarinic Acid 4CL medium pass
Ctin09G0013410.1 Rosmarinic Acid 4CL medium pass
Ctin09G0022380.1 Rosmarinic Acid 4CL low borderline
Ctin10G0010470.1 Rosmarinic Acid 4CL low borderline
Ctin10G0010470.2 Rosmarinic Acid 4CL low borderline
Ctin10G0010470.3 Rosmarinic Acid 4CL low borderline
Ctin10G0022190.1 Rosmarinic Acid 4CL medium pass
Ctin11G0009290.1 Rosmarinic Acid 4CL medium pass
Ctin11G0016090.1 Rosmarinic Acid 4CL low borderline
Ctin11G0016610.1 Rosmarinic Acid 4CL medium pass
Ctin11G0016610.2 Rosmarinic Acid 4CL medium pass
Ctin11G0016610.3 Rosmarinic Acid 4CL medium pass
Ctin11G0016620.1 Rosmarinic Acid 4CL medium pass
Ctin11G0016630.1 Rosmarinic Acid 4CL medium pass
Ctin11G0016630.2 Rosmarinic Acid 4CL medium pass
Ctin11G0016630.3 Rosmarinic Acid 4CL medium pass
Ctin11G0024510.1 Rosmarinic Acid 4CL low borderline
Ctin12G0000800.1 Rosmarinic Acid 4CL medium pass
Ctin12G0001210.1 Rosmarinic Acid 4CL medium pass
Ctin12G0001220.1 Rosmarinic Acid 4CL low borderline
Ctin12G0001270.1 Rosmarinic Acid 4CL medium pass
Ctin12G0003350.1 Rosmarinic Acid 4CL medium pass
Ctin01G0001970.1 Rosmarinic Acid C4H low borderline
Ctin01G0002600.1 Rosmarinic Acid C4H low borderline
Ctin01G0002600.2 Rosmarinic Acid C4H low borderline
Ctin01G0002620.1 Rosmarinic Acid C4H low borderline
Ctin01G0002640.1 Rosmarinic Acid C4H low borderline
Ctin01G0002660.1 Rosmarinic Acid C4H medium pass
Ctin01G0002680.1 Rosmarinic Acid C4H medium pass
Ctin01G0002690.1 Rosmarinic Acid C4H medium pass
Ctin01G0004450.1 Rosmarinic Acid C4H low borderline
Ctin01G0004930.1 Rosmarinic Acid C4H low borderline
Ctin01G0005230.1 Rosmarinic Acid C4H low borderline
Ctin01G0005230.2 Rosmarinic Acid C4H low borderline
Ctin01G0005360.1 Rosmarinic Acid C4H low borderline
Ctin01G0005490.1 Rosmarinic Acid C4H low borderline
Ctin01G0007950.1 Rosmarinic Acid C4H low borderline
Ctin01G0007960.1 Rosmarinic Acid C4H low borderline
Ctin01G0007960.2 Rosmarinic Acid C4H low borderline
Ctin01G0007960.3 Rosmarinic Acid C4H low borderline
Ctin01G0007970.1 Rosmarinic Acid C4H low borderline
Ctin01G0010670.1 Rosmarinic Acid C4H low borderline
Ctin01G0010680.1 Rosmarinic Acid C4H low borderline