PlantSME Plant secondary metabolism enzyme database

Carthamus tinctorius (carthamus_tinctorius)

Imported from atlas release summary for Carthamus tinctorius.

2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 627 19 BAHD (246) View species results
Alkaloid pathway 446 22 7DLGT (95) View species results
Phenylpropanoid pathway 394 11 POD (168) View species results
Flavonoid pathway 257 12 UFGT (170) View species results
Rosmarinic acid pathway 163 7 C4H (62) View species results
Steroid pathway 134 12 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1990 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 421 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Ctin01G0010730.2 Rosmarinic Acid C4H low borderline
Ctin01G0010750.1 Rosmarinic Acid C4H low borderline
Ctin01G0010780.1 Rosmarinic Acid C4H low borderline
Ctin01G0010790.1 Rosmarinic Acid C4H low borderline
Ctin01G0010810.1 Rosmarinic Acid C4H low borderline
Ctin01G0010820.1 Rosmarinic Acid C4H low borderline
Ctin01G0016470.1 Rosmarinic Acid C4H medium pass
Ctin01G0016910.1 Rosmarinic Acid C4H medium pass
Ctin01G0020190.1 Rosmarinic Acid C4H low borderline
Ctin01G0023050.1 Rosmarinic Acid C4H low borderline
Ctin02G0000690.1 Rosmarinic Acid C4H low borderline
Ctin02G0000700.1 Rosmarinic Acid C4H low borderline
Ctin02G0000700.2 Rosmarinic Acid C4H low borderline
Ctin02G0000730.1 Rosmarinic Acid C4H low borderline
Ctin02G0001020.1 Rosmarinic Acid C4H low borderline
Ctin02G0001030.1 Rosmarinic Acid C4H low borderline
Ctin02G0001040.1 Rosmarinic Acid C4H low borderline
Ctin02G0001050.1 Rosmarinic Acid C4H medium pass
Ctin02G0001060.1 Rosmarinic Acid C4H medium pass
Ctin02G0004540.1 Rosmarinic Acid C4H low borderline
Ctin02G0007010.1 Rosmarinic Acid C4H low borderline
Ctin02G0008860.1 Rosmarinic Acid C4H low borderline
Ctin02G0008870.1 Rosmarinic Acid C4H low borderline
Ctin02G0008900.1 Rosmarinic Acid C4H low borderline
Ctin02G0008930.1 Rosmarinic Acid C4H low borderline
Ctin02G0015110.1 Rosmarinic Acid C4H low borderline
Ctin02G0015110.2 Rosmarinic Acid C4H low borderline
Ctin02G0016950.1 Rosmarinic Acid C4H low borderline
Ctin03G0002010.2 Rosmarinic Acid C4H low borderline
Ctin03G0007790.1 Rosmarinic Acid C4H low borderline
Ctin03G0010890.1 Rosmarinic Acid C4H low borderline
Ctin03G0010890.2 Rosmarinic Acid C4H low borderline
Ctin03G0010920.1 Rosmarinic Acid C4H low borderline
Ctin03G0010950.1 Rosmarinic Acid C4H low borderline
Ctin03G0010950.2 Rosmarinic Acid C4H low borderline
Ctin03G0010950.3 Rosmarinic Acid C4H low borderline
Ctin03G0010980.1 Rosmarinic Acid C4H low borderline
Ctin03G0013110.1 Rosmarinic Acid C4H low borderline
Ctin03G0015930.1 Rosmarinic Acid C4H low borderline
Ctin03G0015940.1 Rosmarinic Acid C4H low borderline
Ctin03G0015940.2 Rosmarinic Acid C4H low borderline
Ctin03G0022740.1 Rosmarinic Acid C4H medium pass
Ctin03G0022760.1 Rosmarinic Acid C4H low borderline
Ctin03G0022780.1 Rosmarinic Acid C4H low borderline
Ctin03G0022930.1 Rosmarinic Acid C4H low borderline
Ctin03G0025050.1 Rosmarinic Acid C4H low borderline
Ctin03G0025050.3 Rosmarinic Acid C4H low borderline
Ctin03G0025050.4 Rosmarinic Acid C4H low borderline
Ctin03G0028350.1 Rosmarinic Acid C4H medium pass
Ctin03G0028360.1 Rosmarinic Acid C4H low borderline