PlantSME Plant secondary metabolism enzyme database

Carthamus tinctorius (carthamus_tinctorius)

Imported from atlas release summary for Carthamus tinctorius.

2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 627 19 BAHD (246) View species results
Alkaloid pathway 446 22 7DLGT (95) View species results
Phenylpropanoid pathway 394 11 POD (168) View species results
Flavonoid pathway 257 12 UFGT (170) View species results
Rosmarinic acid pathway 163 7 C4H (62) View species results
Steroid pathway 134 12 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1990 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 421 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Ctin03G0028370.1 Rosmarinic Acid C4H low borderline
Ctin03G0028380.1 Rosmarinic Acid C4H low borderline
Ctin03G0028390.1 Rosmarinic Acid C4H low borderline
Ctin03G0028410.1 Rosmarinic Acid C4H medium pass
Ctin03G0030340.1 Rosmarinic Acid C4H medium pass
Ctin04G0004780.1 Rosmarinic Acid C4H low borderline
Ctin04G0005220.1 Rosmarinic Acid C4H medium pass
Ctin04G0005300.2 Rosmarinic Acid C4H low borderline
Ctin04G0005470.3 Rosmarinic Acid C4H low borderline
Ctin04G0005610.1 Rosmarinic Acid C4H low borderline
Ctin04G0006260.1 Rosmarinic Acid C4H low borderline
Ctin04G0006270.1 Rosmarinic Acid C4H low borderline
Ctin04G0006280.1 Rosmarinic Acid C4H low borderline
Ctin04G0008860.1 Rosmarinic Acid C4H medium pass
Ctin04G0010580.1 Rosmarinic Acid C4H low borderline
Ctin04G0010690.1 Rosmarinic Acid C4H low borderline
Ctin04G0016400.1 Rosmarinic Acid C4H low borderline
Ctin04G0017450.1 Rosmarinic Acid C4H low borderline
Ctin04G0017470.1 Rosmarinic Acid C4H low borderline
Ctin04G0017470.2 Rosmarinic Acid C4H low borderline
Ctin04G0017480.1 Rosmarinic Acid C4H medium pass
Ctin04G0017490.1 Rosmarinic Acid C4H low borderline
Ctin04G0020540.1 Rosmarinic Acid C4H low borderline
Ctin04G0020540.2 Rosmarinic Acid C4H low borderline
Ctin04G0020610.2 Rosmarinic Acid C4H low borderline
Ctin04G0021130.1 Rosmarinic Acid C4H low borderline
Ctin04G0021140.1 Rosmarinic Acid C4H low borderline
Ctin04G0021150.1 Rosmarinic Acid C4H low borderline
Ctin04G0021170.1 Rosmarinic Acid C4H low borderline
Ctin04G0021190.1 Rosmarinic Acid C4H low borderline
Ctin04G0021200.1 Rosmarinic Acid C4H low borderline
Ctin04G0021210.1 Rosmarinic Acid C4H medium pass
Ctin04G0021220.1 Rosmarinic Acid C4H low borderline
Ctin04G0021230.1 Rosmarinic Acid C4H low borderline
Ctin04G0021250.1 Rosmarinic Acid C4H low borderline
Ctin04G0025180.1 Rosmarinic Acid C4H low borderline
Ctin05G0002610.1 Rosmarinic Acid C4H low borderline
Ctin05G0010670.1 Rosmarinic Acid C4H low borderline
Ctin05G0011550.1 Rosmarinic Acid C4H low borderline
Ctin05G0013130.1 Rosmarinic Acid C4H low borderline
Ctin05G0013600.1 Rosmarinic Acid C4H low borderline
Ctin05G0013920.1 Rosmarinic Acid C4H medium pass
Ctin05G0013940.1 Rosmarinic Acid C4H medium pass
Ctin05G0013950.1 Rosmarinic Acid C4H medium pass
Ctin05G0017210.1 Rosmarinic Acid C4H low borderline
Ctin05G0021580.1 Rosmarinic Acid C4H low borderline
Ctin06G0004110.1 Rosmarinic Acid C4H low borderline
Ctin06G0011860.1 Rosmarinic Acid C4H medium pass
Ctin06G0011880.1 Rosmarinic Acid C4H low borderline
Ctin06G0018900.1 Rosmarinic Acid C4H low borderline