PlantSME Plant secondary metabolism enzyme database

Carthamus tinctorius (carthamus_tinctorius)

Imported from atlas release summary for Carthamus tinctorius.

2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 627 19 BAHD (246) View species results
Alkaloid pathway 446 22 7DLGT (95) View species results
Phenylpropanoid pathway 394 11 POD (168) View species results
Flavonoid pathway 257 12 UFGT (170) View species results
Rosmarinic acid pathway 163 7 C4H (62) View species results
Steroid pathway 134 12 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1990 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 421 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Ctin09G0028020.1 Flavonoid F3'H/CYP75B medium borderline
Ctin09G0028020.2 Flavonoid F3'H/CYP75B medium borderline
Ctin09G0028040.1 Flavonoid F3'H/CYP75B medium borderline
Ctin09G0028750.1 Flavonoid F3'H/CYP75B medium borderline
Ctin10G0002360.1 Flavonoid F3'H/CYP75B medium borderline
Ctin10G0022160.1 Flavonoid F3'H/CYP75B low borderline
Ctin10G0023650.1 Flavonoid F3'H/CYP75B medium pass
Ctin11G0001120.1 Flavonoid F3'H/CYP75B medium borderline
Ctin11G0001130.1 Flavonoid F3'H/CYP75B medium borderline
Ctin11G0019850.1 Flavonoid F3'H/CYP75B medium borderline
Ctin12G0001160.1 Flavonoid F3'H/CYP75B medium borderline
Ctin12G0014160.1 Flavonoid F3'H/CYP75B low borderline
Ctin01G0005760.1 Flavonoid F3H medium borderline
Ctin01G0009660.1 Flavonoid F3H medium borderline
Ctin01G0009670.2 Flavonoid F3H medium borderline
Ctin01G0009900.1 Flavonoid F3H medium borderline
Ctin01G0009920.3 Flavonoid F3H medium borderline
Ctin01G0009920.4 Flavonoid F3H medium borderline
Ctin01G0009930.1 Flavonoid F3H medium borderline
Ctin01G0009940.1 Flavonoid F3H medium borderline
Ctin01G0009940.2 Flavonoid F3H medium borderline
Ctin01G0009950.1 Flavonoid F3H medium borderline
Ctin01G0009960.1 Flavonoid F3H medium borderline
Ctin01G0013170.1 Flavonoid F3H low borderline
Ctin01G0013830.1 Flavonoid F3H medium borderline
Ctin01G0014300.1 Flavonoid F3H medium borderline
Ctin01G0015360.1 Flavonoid F3H medium borderline
Ctin01G0015360.2 Flavonoid F3H medium borderline
Ctin01G0019910.1 Flavonoid F3H medium borderline
Ctin01G0019920.1 Flavonoid F3H medium borderline
Ctin01G0019940.1 Flavonoid F3H medium borderline
Ctin01G0023650.1 Flavonoid F3H medium borderline
Ctin02G0000280.1 Flavonoid F3H low borderline
Ctin02G0000280.2 Flavonoid F3H low borderline
Ctin02G0006120.1 Flavonoid F3H medium borderline
Ctin03G0003840.1 Flavonoid F3H medium borderline
Ctin03G0008810.1 Flavonoid F3H medium borderline
Ctin03G0008830.1 Flavonoid F3H medium borderline
Ctin03G0008860.1 Flavonoid F3H low borderline
Ctin03G0012650.1 Flavonoid F3H low borderline
Ctin03G0018720.1 Flavonoid F3H medium borderline
Ctin03G0018740.1 Flavonoid F3H medium borderline
Ctin03G0018750.1 Flavonoid F3H medium borderline
Ctin03G0018760.1 Flavonoid F3H medium borderline
Ctin03G0018790.1 Flavonoid F3H medium borderline
Ctin03G0018820.1 Flavonoid F3H medium borderline
Ctin03G0018830.1 Flavonoid F3H medium borderline
Ctin03G0018860.1 Flavonoid F3H medium borderline
Ctin03G0018880.1 Flavonoid F3H medium borderline
Ctin03G0026310.1 Flavonoid F3H medium borderline