PlantSME Plant secondary metabolism enzyme database

Carthamus tinctorius (carthamus_tinctorius)

Imported from atlas release summary for Carthamus tinctorius.

2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 627 19 BAHD (246) View species results
Alkaloid pathway 446 22 7DLGT (95) View species results
Phenylpropanoid pathway 394 11 POD (168) View species results
Flavonoid pathway 257 12 UFGT (170) View species results
Rosmarinic acid pathway 163 7 C4H (62) View species results
Steroid pathway 134 12 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1990 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 421 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Ctin03G0028020.1 Flavonoid F3H medium borderline
Ctin03G0031090.1 Flavonoid F3H medium borderline
Ctin03G0031100.1 Flavonoid F3H medium borderline
Ctin03G0031110.1 Flavonoid F3H medium borderline
Ctin04G0000630.1 Flavonoid F3H low borderline
Ctin04G0000640.1 Flavonoid F3H low borderline
Ctin04G0012310.1 Flavonoid F3H medium borderline
Ctin04G0016880.1 Flavonoid F3H low borderline
Ctin04G0016880.2 Flavonoid F3H medium borderline
Ctin04G0016880.3 Flavonoid F3H medium borderline
Ctin04G0016890.1 Flavonoid F3H medium borderline
Ctin04G0017540.1 Flavonoid F3H medium borderline
Ctin04G0023390.1 Flavonoid F3H medium borderline
Ctin05G0003300.1 Flavonoid F3H medium borderline
Ctin05G0008140.1 Flavonoid F3H low borderline
Ctin05G0009860.1 Flavonoid F3H low borderline
Ctin05G0009860.2 Flavonoid F3H medium borderline
Ctin05G0011020.1 Flavonoid F3H low borderline
Ctin05G0011080.1 Flavonoid F3H medium borderline
Ctin05G0011080.2 Flavonoid F3H medium borderline
Ctin05G0011460.1 Flavonoid F3H medium borderline
Ctin05G0012800.1 Flavonoid F3H medium borderline
Ctin05G0012810.1 Flavonoid F3H low borderline
Ctin05G0012810.2 Flavonoid F3H low borderline
Ctin05G0012830.1 Flavonoid F3H low borderline
Ctin05G0012840.1 Flavonoid F3H low borderline
Ctin05G0012850.1 Flavonoid F3H low borderline
Ctin05G0027560.1 Flavonoid F3H medium borderline
Ctin06G0001360.1 Flavonoid F3H medium borderline
Ctin06G0017030.1 Flavonoid F3H medium borderline
Ctin06G0017320.1 Flavonoid F3H low borderline
Ctin06G0019140.1 Flavonoid F3H medium borderline
Ctin06G0026220.1 Flavonoid F3H medium borderline
Ctin06G0032680.1 Flavonoid F3H medium pass
Ctin07G0003150.1 Flavonoid F3H medium borderline
Ctin07G0006780.1 Flavonoid F3H medium borderline
Ctin07G0009620.1 Flavonoid F3H medium borderline
Ctin07G0012310.1 Flavonoid F3H medium borderline
Ctin07G0014040.1 Flavonoid F3H medium borderline
Ctin07G0014040.2 Flavonoid F3H medium borderline
Ctin07G0022440.1 Flavonoid F3H medium borderline
Ctin07G0023470.1 Flavonoid F3H low borderline
Ctin07G0024440.1 Flavonoid F3H medium borderline
Ctin08G0001030.1 Flavonoid F3H low borderline
Ctin08G0003940.1 Flavonoid F3H medium borderline
Ctin08G0017290.1 Flavonoid F3H low borderline
Ctin08G0017310.1 Flavonoid F3H low borderline
Ctin08G0017320.1 Flavonoid F3H low borderline
Ctin08G0017330.1 Flavonoid F3H low borderline
Ctin08G0017340.1 Flavonoid F3H low borderline