PlantSME Plant secondary metabolism enzyme database

Chiococca alba (chiococca_alba)

Imported from atlas release summary for Chiococca alba.

2531
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 804 19 BAHD (329) View species results
Alkaloid pathway 614 25 7DLGT (110) View species results
Phenylpropanoid pathway 415 12 POD (166) View species results
Flavonoid pathway 325 11 UFGT (209) View species results
Rosmarinic acid pathway 208 7 C4H (90) View species results
Steroid pathway 165 16 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2546 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 508 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Calb1870039190.2 Alkaloid 7DLGT low borderline
Calb1870039190.3 Alkaloid 7DLGT low borderline
Calb1870039190.4 Alkaloid 7DLGT low borderline
Calb1870039210.1 Alkaloid 7DLGT low borderline
Calb1880046080.1 Alkaloid 7DLGT medium pass
Calb1880046090.1 Alkaloid 7DLGT medium pass
Calb1880046460.1 Alkaloid 7DLGT low borderline
Calb1880047520.1 Alkaloid 7DLGT medium pass
Calb1880047680.1 Alkaloid 7DLGT low borderline
Calb1880047700.1 Alkaloid 7DLGT low borderline
Calb1890053310.1 Alkaloid 7DLGT medium pass
Calb1890053340.1 Alkaloid 7DLGT high pass
Calb1900053790.1 Alkaloid 7DLGT low borderline
Calb1900058250.1 Alkaloid 7DLGT low borderline
Calb1900058260.1 Alkaloid 7DLGT low borderline
Calb1900058270.1 Alkaloid 7DLGT low borderline
Calb1900059250.1 Alkaloid 7DLGT low borderline
Calb1900059260.1 Alkaloid 7DLGT medium pass
Calb1910063550.1 Alkaloid 7DLGT medium pass
Calb1910063560.1 Alkaloid 7DLGT medium pass
Calb1910067160.1 Alkaloid 7DLGT medium pass
Calb1910067170.1 Alkaloid 7DLGT medium pass
Calb1920070810.1 Alkaloid 7DLGT medium pass
Calb1920070820.1 Alkaloid 7DLGT medium pass
Calb1920071460.1 Alkaloid 7DLGT low borderline
Calb1920072350.1 Alkaloid 7DLGT low borderline
Calb1920072560.1 Alkaloid 7DLGT low borderline
Calb1930072870.1 Alkaloid 7DLGT medium pass
Calb1930072880.1 Alkaloid 7DLGT low borderline
Calb1930072900.1 Alkaloid 7DLGT medium pass
Calb1930072910.1 Alkaloid 7DLGT medium pass
Calb1930072920.1 Alkaloid 7DLGT medium pass
Calb1930073750.1 Alkaloid 7DLGT low borderline
Calb1930075400.1 Alkaloid 7DLGT medium pass
Calb1930075410.1 Alkaloid 7DLGT low borderline
Calb1930075420.1 Alkaloid 7DLGT low borderline
Calb1930076550.1 Alkaloid 7DLGT medium pass
Calb1930076560.1 Alkaloid 7DLGT low borderline
Calb1940081240.1 Alkaloid 7DLGT medium pass
Calb1940081250.1 Alkaloid 7DLGT low borderline
Calb1940081260.1 Alkaloid 7DLGT low borderline
Calb1940081280.1 Alkaloid 7DLGT low borderline
Calb2260087590.1 Alkaloid 7DLGT low borderline
Calb2260087600.1 Alkaloid 7DLGT low borderline
Calb2270089680.1 Alkaloid 7DLGT low borderline
Calb2270089690.1 Alkaloid 7DLGT medium pass
Calb2270090360.1 Alkaloid 7DLGT low borderline
Calb2270090370.1 Alkaloid 7DLGT low borderline
Calb2270090380.1 Alkaloid 7DLGT low borderline
Calb2270090390.1 Alkaloid 7DLGT low borderline