PlantSME Plant secondary metabolism enzyme database

Chiococca alba (chiococca_alba)

Imported from atlas release summary for Chiococca alba.

2531
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 804 19 BAHD (329) View species results
Alkaloid pathway 614 25 7DLGT (110) View species results
Phenylpropanoid pathway 415 12 POD (166) View species results
Flavonoid pathway 325 11 UFGT (209) View species results
Rosmarinic acid pathway 208 7 C4H (90) View species results
Steroid pathway 165 16 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2546 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 508 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Calb2270090400.1 Alkaloid 7DLGT low borderline
Calb2270090400.2 Alkaloid 7DLGT low borderline
Calb2280092940.1 Alkaloid 7DLGT low borderline
Calb2280092950.1 Alkaloid 7DLGT low borderline
Calb2320104910.1 Alkaloid 7DLGT low borderline
Calb2320104920.1 Alkaloid 7DLGT low borderline
Calb2320104930.1 Alkaloid 7DLGT low borderline
Calb2340108960.1 Alkaloid 7DLGT medium pass
Calb2380117960.1 Alkaloid 7DLGT low borderline
Calb2380117960.2 Alkaloid 7DLGT low borderline
Calb2400123760.1 Alkaloid 7DLGT low borderline
Calb2420125080.1 Alkaloid 7DLGT low borderline
Calb2430129440.1 Alkaloid 7DLGT low borderline
Calb2540135760.1 Alkaloid 7DLGT low borderline
Calb2580138990.1 Alkaloid 7DLGT medium pass
Calb2640148440.1 Alkaloid 7DLGT medium pass
Calb2640148450.1 Alkaloid 7DLGT medium pass
Calb2640148450.2 Alkaloid 7DLGT medium pass
Calb2640148460.1 Alkaloid 7DLGT medium pass
Calb2650150050.1 Alkaloid 7DLGT medium pass
Calb2650153720.1 Alkaloid 7DLGT high pass
Calb2650153730.1 Alkaloid 7DLGT medium pass
Calb2650153740.1 Alkaloid 7DLGT medium pass
Calb2650153750.1 Alkaloid 7DLGT medium pass
Calb2650153760.1 Alkaloid 7DLGT low borderline
Calb2650155810.1 Alkaloid 7DLGT low borderline
Calb2650155930.1 Alkaloid 7DLGT high pass
Calb2680161620.1 Alkaloid 7DLGT low borderline
Calb2680161650.1 Alkaloid 7DLGT low borderline
Calb2690162940.1 Alkaloid 7DLGT low borderline
Calb2690162940.2 Alkaloid 7DLGT low borderline
Calb2750169130.1 Alkaloid 7DLGT low borderline
Calb2750169180.1 Alkaloid 7DLGT low borderline
Calb2750169190.1 Alkaloid 7DLGT medium pass
Calb2790171090.1 Alkaloid 7DLGT low borderline
Calb2790173210.1 Alkaloid 7DLGT medium pass
Calb2790173230.1 Alkaloid 7DLGT medium pass
Calb2790173250.1 Alkaloid 7DLGT medium pass
Calb2790173260.1 Alkaloid 7DLGT medium pass
Calb3100177590.1 Alkaloid 7DLGT low borderline
Calb3130180230.1 Alkaloid 7DLGT low borderline
Calb3130180280.1 Alkaloid 7DLGT medium pass
Calb3130180490.1 Alkaloid 7DLGT high pass
Calb3130180500.1 Alkaloid 7DLGT low borderline
Calb3130180520.1 Alkaloid 7DLGT medium pass
Calb3140180550.1 Alkaloid 7DLGT low borderline
Calb3140180560.1 Alkaloid 7DLGT low borderline
Calb3140180570.1 Alkaloid 7DLGT low borderline
Calb3140180580.1 Alkaloid 7DLGT low borderline
Calb3140180590.1 Alkaloid 7DLGT low borderline