PlantSME Plant secondary metabolism enzyme database

Chiococca alba (chiococca_alba)

Imported from atlas release summary for Chiococca alba.

2531
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 804 19 BAHD (329) View species results
Alkaloid pathway 614 25 7DLGT (110) View species results
Phenylpropanoid pathway 415 12 POD (166) View species results
Flavonoid pathway 325 11 UFGT (209) View species results
Rosmarinic acid pathway 208 7 C4H (90) View species results
Steroid pathway 165 16 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2546 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 508 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Calb2280091920.2 Flavonoid ANS/LDOX medium borderline
Calb2400121570.1 Flavonoid ANS/LDOX medium borderline
Calb2630147350.1 Flavonoid ANS/LDOX medium borderline
Calb3110179690.1 Flavonoid ANS/LDOX medium pass
Calb5020251540.1 Flavonoid ANS/LDOX low borderline
Calb5020251560.1 Flavonoid ANS/LDOX medium borderline
Calb5020251600.1 Flavonoid ANS/LDOX medium borderline
Calb5020251690.1 Flavonoid ANS/LDOX medium pass
Calb6830291350.1 Flavonoid ANS/LDOX medium borderline
Calb750340307570.1 Flavonoid ANS/LDOX medium pass
Calb774260326210.1 Flavonoid ANS/LDOX medium borderline
Calb774380326430.1 Flavonoid ANS/LDOX medium pass
Calb774380326450.2 Flavonoid ANS/LDOX medium borderline
Calb777320340980.1 Flavonoid ANS/LDOX low borderline
Calb780210345690.1 Flavonoid ANS/LDOX medium pass
Calb845160347950.1 Flavonoid ANS/LDOX medium borderline
Calb1202710001430.3 Flavonoid C4H medium borderline
Calb1870039610.1 Flavonoid C4H medium borderline
Calb1950085730.1 Flavonoid C4H low borderline
Calb3080176030.1 Flavonoid C4H medium borderline
Calb3380200350.1 Flavonoid C4H medium borderline
Calb3480208890.1 Flavonoid C4H medium borderline
Calb4420237230.1 Flavonoid C4H medium borderline
Calb4800246560.1 Flavonoid C4H medium borderline
Calb772630321450.1 Flavonoid C4H medium borderline
Calb776980337030.1 Flavonoid C4H low borderline
Calb1860031310.1 Flavonoid CHI medium pass
Calb1910069060.1 Flavonoid CHI medium pass
Calb1930073220.1 Flavonoid CHI medium pass
Calb2650152430.1 Flavonoid CHI medium pass
Calb2650154810.1 Flavonoid CHI medium pass
Calb2710165480.1 Flavonoid CHI medium pass
Calb2710165490.1 Flavonoid CHI medium pass
Calb2710165500.1 Flavonoid CHI medium pass
Calb3100178070.1 Flavonoid CHI medium pass
Calb3250189850.1 Flavonoid CHI medium pass
Calb3500213000.1 Flavonoid CHI medium pass
Calb7220300740.1 Flavonoid CHI low borderline
Calb741260305180.1 Flavonoid CHI medium pass
Calb1880049750.1 Flavonoid CHS medium pass
Calb1880049750.2 Flavonoid CHS medium pass
Calb2380117500.1 Flavonoid CHS medium pass
Calb2450134200.1 Flavonoid CHS medium pass
Calb2450134360.1 Flavonoid CHS medium pass
Calb3100179210.1 Flavonoid CHS medium pass
Calb3280193880.1 Flavonoid CHS medium pass
Calb3530218340.1 Flavonoid CHS low borderline
Calb3530218340.2 Flavonoid CHS low borderline
Calb3530218340.3 Flavonoid CHS low borderline
Calb3990232200.1 Flavonoid CHS medium pass