PlantSME Plant secondary metabolism enzyme database

Chiococca alba (chiococca_alba)

Imported from atlas release summary for Chiococca alba.

2531
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 804 19 BAHD (329) View species results
Alkaloid pathway 614 25 7DLGT (110) View species results
Phenylpropanoid pathway 415 12 POD (166) View species results
Flavonoid pathway 325 11 UFGT (209) View species results
Rosmarinic acid pathway 208 7 C4H (90) View species results
Steroid pathway 165 16 CAS (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2546 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 508 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Calb3550221310.1 Flavonoid 4CL low borderline
Calb3940231850.1 Flavonoid 4CL medium pass
Calb5180254850.1 Flavonoid 4CL medium pass
Calb5230257460.1 Flavonoid 4CL medium pass
Calb5230257460.2 Flavonoid 4CL medium pass
Calb5570265780.1 Flavonoid 4CL medium pass
Calb5760270320.1 Flavonoid 4CL medium pass
Calb5760270320.2 Flavonoid 4CL medium pass
Calb612510273770.1 Flavonoid 4CL low borderline
Calb6150274170.1 Flavonoid 4CL low borderline
Calb6150274170.2 Flavonoid 4CL low borderline
Calb6150274170.3 Flavonoid 4CL low borderline
Calb6360278630.1 Flavonoid 4CL medium pass
Calb6410280530.1 Flavonoid 4CL medium pass
Calb769170316480.1 Flavonoid 4CL low borderline
Calb776980337470.1 Flavonoid 4CL low borderline
Calb781370347480.1 Flavonoid 4CL medium pass
Calb860600348100.1 Flavonoid 4CL medium pass
Calb1870039110.1 Flavonoid ANR medium borderline
Calb1870039110.2 Flavonoid ANR medium borderline
Calb1870039120.1 Flavonoid ANR medium borderline
Calb1870039140.1 Flavonoid ANR medium borderline
Calb1870041930.1 Flavonoid ANR low borderline
Calb1870041930.2 Flavonoid ANR low borderline
Calb1910063130.1 Flavonoid ANR medium borderline
Calb1910068730.1 Flavonoid ANR low borderline
Calb1930075740.1 Flavonoid ANR low borderline
Calb2280094220.1 Flavonoid ANR medium borderline
Calb2390118140.1 Flavonoid ANR medium borderline
Calb2400120290.1 Flavonoid ANR medium borderline
Calb3100177790.1 Flavonoid ANR low borderline
Calb3250189760.1 Flavonoid ANR medium borderline
Calb3370199860.1 Flavonoid ANR medium borderline
Calb3370199870.1 Flavonoid ANR medium borderline
Calb3370199880.1 Flavonoid ANR medium borderline
Calb3370199880.2 Flavonoid ANR medium borderline
Calb4300234870.1 Flavonoid ANR medium borderline
Calb4890248050.1 Flavonoid ANR medium borderline
Calb6380279910.1 Flavonoid ANR low borderline
Calb7080295640.1 Flavonoid ANR medium borderline
Calb771700320070.1 Flavonoid ANR medium borderline
Calb771700320080.1 Flavonoid ANR medium borderline
Calb771880320520.1 Flavonoid ANR medium borderline
Calb771880320530.1 Flavonoid ANR medium borderline
Calb776790333970.1 Flavonoid ANR medium borderline
Calb988480348750.1 Flavonoid ANR medium borderline
Calb988480348750.2 Flavonoid ANR medium borderline
Calb1042790000230.1 Flavonoid ANS/LDOX medium pass
Calb1870044100.1 Flavonoid ANS/LDOX medium borderline
Calb1870044100.2 Flavonoid ANS/LDOX medium borderline