PlantSME Plant secondary metabolism enzyme database

Citrus grandis (citrus_grandis)

Imported from atlas release summary for Citrus grandis.

2318
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 687 19 BAHD (281) View species results
Alkaloid pathway 590 26 GES (105) View species results
Phenylpropanoid pathway 388 11 POD (171) View species results
Flavonoid pathway 262 8 UFGT (152) View species results
Rosmarinic acid pathway 222 7 C4H (80) View species results
Steroid pathway 169 13 CAS (107) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2050 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 458 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BBE
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Gene Pathway Family Confidence Status
CIgra08G0005990.1 Alkaloid BBE low borderline
CIgra08G0005990.2 Alkaloid BBE low borderline
CIgra08G0005990.3 Alkaloid BBE low borderline
CIgra08G0005990.4 Alkaloid BBE low borderline
CIgra08G0009640.1 Alkaloid BBE medium borderline
CIgra08G0009700.1 Alkaloid BBE medium borderline
CIgra08G0017570.1 Alkaloid BBE medium borderline
CIgra08G0017580.1 Alkaloid BBE medium borderline
CIgra09G0023010.1 Alkaloid BBE medium borderline
CIgra09G0023020.1 Alkaloid BBE medium borderline
CIgra09G0023030.1 Alkaloid BBE medium borderline
CIgra09G0023040.1 Alkaloid BBE medium borderline
CIgra09G0023140.1 Alkaloid BBE medium borderline
CIgra09G0027230.1 Alkaloid BBE medium borderline
CIgra09G0027250.1 Alkaloid BBE medium borderline
CIgra09G0027730.1 Alkaloid BBE medium borderline
CIgraUnG0009590.1 Alkaloid BBE medium borderline
CIgraUnG0009610.1 Alkaloid BBE medium borderline
CIgraUnG0009620.1 Alkaloid BBE medium borderline
CIgraUnG0010550.1 Alkaloid BBE medium borderline
CIgraUnG0010640.1 Alkaloid BBE medium borderline
CIgraUnG0010650.1 Alkaloid BBE medium borderline
CIgraUnG0010660.1 Alkaloid BBE medium borderline
CIgraUnG0012720.1 Alkaloid BBE medium borderline
CIgraUnG0012740.1 Alkaloid BBE medium borderline
CIgraUnG0012750.1 Alkaloid BBE medium borderline
CIgraUnG0018930.1 Alkaloid BBE medium borderline
CIgraUnG0019450.1 Alkaloid BBE medium borderline