PlantSME Plant secondary metabolism enzyme database

Citrus grandis (citrus_grandis)

Imported from atlas release summary for Citrus grandis.

2318
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 687 19 BAHD (281) View species results
Alkaloid pathway 590 26 GES (105) View species results
Phenylpropanoid pathway 388 11 POD (171) View species results
Flavonoid pathway 262 8 UFGT (152) View species results
Rosmarinic acid pathway 222 7 C4H (80) View species results
Steroid pathway 169 13 CAS (107) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2050 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 458 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
CIgra01G0006010.1 Alkaloid T16H low borderline
CIgra01G0006030.1 Alkaloid T16H medium borderline
CIgra01G0024060.1 Alkaloid T16H medium borderline
CIgra01G0024360.1 Alkaloid T16H medium borderline
CIgra01G0027490.1 Alkaloid T16H low borderline
CIgra02G0005150.1 Alkaloid T16H medium borderline
CIgra02G0019010.1 Alkaloid T16H low borderline
CIgra02G0033300.1 Alkaloid T16H medium borderline
CIgra02G0040120.1 Alkaloid T16H low borderline
CIgra03G0000780.1 Alkaloid T16H medium borderline
CIgra03G0000790.1 Alkaloid T16H medium borderline
CIgra03G0008040.1 Alkaloid T16H medium borderline
CIgra03G0008100.1 Alkaloid T16H medium borderline
CIgra03G0008110.1 Alkaloid T16H medium borderline
CIgra03G0008130.1 Alkaloid T16H low borderline
CIgra03G0008140.1 Alkaloid T16H high pass
CIgra03G0020800.1 Alkaloid T16H low borderline
CIgra03G0021360.1 Alkaloid T16H medium borderline
CIgra03G0021360.2 Alkaloid T16H medium borderline
CIgra04G0013380.1 Alkaloid T16H medium borderline
CIgra04G0013450.1 Alkaloid T16H medium pass
CIgra04G0020580.1 Alkaloid T16H medium borderline
CIgra05G0005850.1 Alkaloid T16H medium borderline
CIgra05G0005870.1 Alkaloid T16H medium borderline
CIgra05G0005890.1 Alkaloid T16H high pass
CIgra05G0005910.1 Alkaloid T16H medium borderline
CIgra05G0022340.1 Alkaloid T16H medium borderline
CIgra05G0022370.1 Alkaloid T16H medium borderline
CIgra05G0022440.1 Alkaloid T16H medium borderline
CIgra05G0022450.1 Alkaloid T16H medium borderline
CIgra05G0022470.1 Alkaloid T16H medium borderline
CIgra05G0027670.3 Alkaloid T16H low borderline
CIgra05G0027670.4 Alkaloid T16H low borderline
CIgra05G0028530.1 Alkaloid T16H medium borderline
CIgra05G0028540.1 Alkaloid T16H medium borderline
CIgra06G0007860.1 Alkaloid T16H medium borderline
CIgra06G0007880.1 Alkaloid T16H medium borderline
CIgra06G0007890.1 Alkaloid T16H medium borderline
CIgra06G0008670.1 Alkaloid T16H medium borderline
CIgra06G0012060.2 Alkaloid T16H low borderline
CIgra06G0012060.3 Alkaloid T16H low borderline
CIgra07G0002890.1 Alkaloid T16H low borderline
CIgra07G0003550.1 Alkaloid T16H medium borderline
CIgra07G0003610.1 Alkaloid T16H medium borderline
CIgra07G0003640.1 Alkaloid T16H medium borderline
CIgra07G0003740.2 Alkaloid T16H medium borderline
CIgra07G0007870.1 Alkaloid T16H medium borderline
CIgra08G0023470.1 Alkaloid T16H low borderline
CIgra08G0024840.1 Alkaloid T16H medium borderline