PlantSME Plant secondary metabolism enzyme database

Citrus grandis (citrus_grandis)

Imported from atlas release summary for Citrus grandis.

2318
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 687 19 BAHD (281) View species results
Alkaloid pathway 590 26 GES (105) View species results
Phenylpropanoid pathway 388 11 POD (171) View species results
Flavonoid pathway 262 8 UFGT (152) View species results
Rosmarinic acid pathway 222 7 C4H (80) View species results
Steroid pathway 169 13 CAS (107) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2050 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 458 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
CIgra01G0015060.1 Alkaloid PMT low borderline
CIgra01G0015080.1 Alkaloid PMT low borderline
CIgra02G0004590.1 Alkaloid PMT low borderline
CIgra02G0004600.1 Alkaloid PMT medium pass
CIgra02G0004630.1 Alkaloid PMT medium pass
CIgra02G0004650.1 Alkaloid PMT low borderline
CIgra02G0004710.1 Alkaloid PMT medium pass
CIgra02G0004750.1 Alkaloid PMT low borderline
CIgra02G0004780.1 Alkaloid PMT medium pass
CIgra02G0010510.1 Alkaloid PMT low borderline
CIgra02G0020180.1 Alkaloid PMT low borderline
CIgra02G0025640.1 Alkaloid PMT low borderline
CIgra03G0023180.1 Alkaloid PMT low borderline
CIgra04G0018880.1 Alkaloid PMT medium pass
CIgra04G0023550.1 Alkaloid PMT medium pass
CIgra04G0023560.1 Alkaloid PMT low borderline
CIgra05G0004750.1 Alkaloid PMT medium borderline
CIgra05G0039220.1 Alkaloid PMT medium pass
CIgra06G0007760.1 Alkaloid PMT medium pass
CIgra07G0002230.1 Alkaloid PMT low borderline
CIgra07G0004370.1 Alkaloid PMT low borderline
CIgra07G0019560.1 Alkaloid PMT medium borderline
CIgra09G0005310.1 Alkaloid PMT medium pass
CIgra09G0028600.1 Alkaloid PMT medium borderline
CIgraUnG0006770.1 Alkaloid PMT medium pass
CIgraUnG0006800.1 Alkaloid PMT low borderline
CIgraUnG0006850.1 Alkaloid PMT low borderline