PlantSME Plant secondary metabolism enzyme database

Citrus grandis (citrus_grandis)

Imported from atlas release summary for Citrus grandis.

2318
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 687 19 BAHD (281) View species results
Alkaloid pathway 590 26 GES (105) View species results
Phenylpropanoid pathway 388 11 POD (171) View species results
Flavonoid pathway 262 8 UFGT (152) View species results
Rosmarinic acid pathway 222 7 C4H (80) View species results
Steroid pathway 169 13 CAS (107) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2050 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 458 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Gene Pathway Family Confidence Status
CIgra01G0001690.1 Steroid CYP90D1 medium borderline
CIgra01G0003270.1 Steroid CYP90D1 low borderline
CIgra01G0009640.2 Steroid CYP90D1 medium borderline
CIgra01G0009640.3 Steroid CYP90D1 medium borderline
CIgra01G0010610.1 Steroid CYP90D1 low borderline
CIgra01G0010620.1 Steroid CYP90D1 low borderline
CIgra01G0010650.1 Steroid CYP90D1 low borderline
CIgra01G0028170.1 Steroid CYP90D1 low borderline
CIgra02G0025550.1 Steroid CYP90D1 low borderline
CIgra02G0025670.1 Steroid CYP90D1 low borderline
CIgra02G0025690.1 Steroid CYP90D1 low borderline
CIgra02G0025700.1 Steroid CYP90D1 low borderline
CIgra02G0025710.1 Steroid CYP90D1 low borderline
CIgra02G0025720.1 Steroid CYP90D1 low borderline
CIgra02G0025880.1 Steroid CYP90D1 low borderline
CIgra02G0026450.1 Steroid CYP90D1 low borderline
CIgra02G0026870.1 Steroid CYP90D1 low borderline
CIgra02G0040110.1 Steroid CYP90D1 medium borderline
CIgra03G0000770.1 Steroid CYP90D1 low borderline
CIgra03G0000780.1 Steroid CYP90D1 low borderline
CIgra03G0000790.1 Steroid CYP90D1 low borderline
CIgra03G0005190.1 Steroid CYP90D1 low borderline
CIgra03G0017910.1 Steroid CYP90D1 medium borderline
CIgra03G0018260.1 Steroid CYP90D1 medium borderline
CIgra03G0022000.1 Steroid CYP90D1 low borderline
CIgra03G0022010.1 Steroid CYP90D1 low borderline
CIgra04G0006870.1 Steroid CYP90D1 low borderline
CIgra04G0009010.1 Steroid CYP90D1 low borderline
CIgra04G0020210.1 Steroid CYP90D1 medium borderline
CIgra05G0005890.1 Steroid CYP90D1 low borderline
CIgra05G0012600.1 Steroid CYP90D1 low borderline
CIgra05G0021980.1 Steroid CYP90D1 low borderline
CIgra05G0028510.1 Steroid CYP90D1 low borderline
CIgra05G0030330.1 Steroid CYP90D1 low borderline
CIgra05G0032090.1 Steroid CYP90D1 low borderline
CIgra05G0032100.1 Steroid CYP90D1 low borderline
CIgra06G0001440.1 Steroid CYP90D1 medium borderline
CIgra06G0016420.1 Steroid CYP90D1 low borderline
CIgra07G0001890.1 Steroid CYP90D1 medium borderline
CIgra07G0004190.1 Steroid CYP90D1 low borderline
CIgra07G0015920.1 Steroid CYP90D1 low borderline
CIgra07G0017180.1 Steroid CYP90D1 medium borderline
CIgra07G0017190.1 Steroid CYP90D1 medium borderline
CIgra08G0005770.1 Steroid CYP90D1 low borderline
CIgra08G0005800.1 Steroid CYP90D1 low borderline
CIgra08G0005810.1 Steroid CYP90D1 low borderline
CIgra08G0023470.1 Steroid CYP90D1 low borderline
CIgra08G0024850.1 Steroid CYP90D1 medium borderline
CIgra09G0018640.1 Steroid CYP90D1 low borderline
CIgra09G0022460.1 Steroid CYP90D1 low borderline