PlantSME Plant secondary metabolism enzyme database

Citrus grandis (citrus_grandis)

Imported from atlas release summary for Citrus grandis.

2318
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 687 19 BAHD (281) View species results
Alkaloid pathway 590 26 GES (105) View species results
Phenylpropanoid pathway 388 11 POD (171) View species results
Flavonoid pathway 262 8 UFGT (152) View species results
Rosmarinic acid pathway 222 7 C4H (80) View species results
Steroid pathway 169 13 CAS (107) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2050 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 458 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
CIgra01G0002060.1 Flavonoid F3H medium borderline
CIgra01G0005750.1 Flavonoid F3H low borderline
CIgra01G0005750.2 Flavonoid F3H low borderline
CIgra01G0005750.3 Flavonoid F3H low borderline
CIgra01G0005750.4 Flavonoid F3H low borderline
CIgra01G0009050.1 Flavonoid F3H medium borderline
CIgra01G0016020.1 Flavonoid F3H low borderline
CIgra01G0016030.1 Flavonoid F3H low borderline
CIgra01G0016040.1 Flavonoid F3H medium borderline
CIgra01G0016050.1 Flavonoid F3H low borderline
CIgra01G0016060.1 Flavonoid F3H low borderline
CIgra01G0016110.1 Flavonoid F3H low borderline
CIgra01G0016120.1 Flavonoid F3H low borderline
CIgra01G0017850.1 Flavonoid F3H medium pass
CIgra01G0017890.1 Flavonoid F3H medium borderline
CIgra01G0017900.1 Flavonoid F3H medium borderline
CIgra01G0018170.1 Flavonoid F3H low borderline
CIgra01G0018190.1 Flavonoid F3H low borderline
CIgra01G0019670.1 Flavonoid F3H medium borderline
CIgra01G0020710.1 Flavonoid F3H medium borderline
CIgra01G0022880.1 Flavonoid F3H medium pass
CIgra01G0022890.1 Flavonoid F3H medium borderline
CIgra01G0027230.1 Flavonoid F3H medium borderline
CIgra02G0000670.1 Flavonoid F3H medium borderline
CIgra02G0000700.1 Flavonoid F3H medium borderline
CIgra02G0000710.1 Flavonoid F3H medium borderline
CIgra02G0000720.1 Flavonoid F3H medium borderline
CIgra02G0005480.1 Flavonoid F3H medium borderline
CIgra02G0019210.1 Flavonoid F3H medium borderline
CIgra02G0019210.2 Flavonoid F3H medium borderline
CIgra02G0029600.1 Flavonoid F3H medium borderline
CIgra02G0029620.1 Flavonoid F3H low borderline
CIgra02G0029660.1 Flavonoid F3H medium borderline
CIgra02G0040470.1 Flavonoid F3H medium borderline
CIgra02G0044070.1 Flavonoid F3H medium borderline
CIgra02G0044080.1 Flavonoid F3H medium borderline
CIgra02G0044090.1 Flavonoid F3H medium borderline
CIgra02G0044090.2 Flavonoid F3H medium borderline
CIgra02G0045690.1 Flavonoid F3H medium borderline
CIgra02G0046130.1 Flavonoid F3H low borderline
CIgra02G0046130.2 Flavonoid F3H low borderline
CIgra02G0046130.3 Flavonoid F3H low borderline
CIgra02G0046130.4 Flavonoid F3H low borderline
CIgra02G0046130.5 Flavonoid F3H low borderline
CIgra02G0046130.6 Flavonoid F3H low borderline
CIgra03G0005420.1 Flavonoid F3H medium borderline
CIgra03G0010200.1 Flavonoid F3H medium borderline
CIgra03G0010210.1 Flavonoid F3H medium borderline
CIgra03G0010210.2 Flavonoid F3H medium borderline
CIgra03G0010210.3 Flavonoid F3H medium borderline