PlantSME Plant secondary metabolism enzyme database

Citrus grandis (citrus_grandis)

Imported from atlas release summary for Citrus grandis.

2318
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 687 19 BAHD (281) View species results
Alkaloid pathway 590 26 GES (105) View species results
Phenylpropanoid pathway 388 11 POD (171) View species results
Flavonoid pathway 262 8 UFGT (152) View species results
Rosmarinic acid pathway 222 7 C4H (80) View species results
Steroid pathway 169 13 CAS (107) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2050 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 458 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAMT
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Gene Pathway Family Confidence Status
CIgra01G0004610.1 Alkaloid LAMT medium borderline
CIgra01G0004610.2 Alkaloid LAMT medium borderline
CIgra01G0004610.3 Alkaloid LAMT medium borderline
CIgra01G0004610.4 Alkaloid LAMT medium borderline
CIgra02G0000080.1 Alkaloid LAMT medium borderline
CIgra02G0020340.1 Alkaloid LAMT medium borderline
CIgra02G0020360.1 Alkaloid LAMT medium borderline
CIgra02G0029290.1 Alkaloid LAMT medium borderline
CIgra02G0029300.1 Alkaloid LAMT medium borderline
CIgra02G0029310.1 Alkaloid LAMT medium borderline
CIgra03G0001050.1 Alkaloid LAMT medium borderline
CIgra03G0001660.1 Alkaloid LAMT medium borderline
CIgra03G0001700.1 Alkaloid LAMT medium borderline
CIgra03G0001730.1 Alkaloid LAMT medium borderline
CIgra03G0003740.1 Alkaloid LAMT medium borderline
CIgra03G0004360.1 Alkaloid LAMT medium borderline
CIgra03G0004360.2 Alkaloid LAMT medium borderline
CIgra03G0004370.1 Alkaloid LAMT medium borderline
CIgra03G0005270.1 Alkaloid LAMT medium borderline
CIgra03G0005400.1 Alkaloid LAMT medium borderline
CIgra03G0005920.1 Alkaloid LAMT medium borderline
CIgra04G0012860.1 Alkaloid LAMT medium pass
CIgra05G0009890.1 Alkaloid LAMT low borderline
CIgra06G0018990.1 Alkaloid LAMT medium borderline
CIgra06G0019000.1 Alkaloid LAMT medium borderline
CIgra06G0019010.1 Alkaloid LAMT medium borderline
CIgra07G0001130.1 Alkaloid LAMT medium borderline
CIgra08G0007570.1 Alkaloid LAMT medium borderline
CIgra09G0011870.1 Alkaloid LAMT medium borderline
CIgra09G0027640.1 Alkaloid LAMT medium borderline
CIgraUnG0017270.1 Alkaloid LAMT medium borderline