PlantSME Plant secondary metabolism enzyme database

Citrus grandis (citrus_grandis)

Imported from atlas release summary for Citrus grandis.

2318
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 687 19 BAHD (281) View species results
Alkaloid pathway 590 26 GES (105) View species results
Phenylpropanoid pathway 388 11 POD (171) View species results
Flavonoid pathway 262 8 UFGT (152) View species results
Rosmarinic acid pathway 222 7 C4H (80) View species results
Steroid pathway 169 13 CAS (107) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2050 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 458 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
CIgra01G0004420.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
CIgra01G0028900.1 Phenylpropanoid LAC low borderline LAC__00002__sp_O81081_LAC2_ARATH
CIgra01G0028930.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
CIgra02G0005640.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
CIgra02G0013970.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
CIgra03G0019230.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
CIgra04G0011420.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
CIgra04G0011430.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
CIgra04G0014750.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
CIgra06G0001870.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
CIgra06G0004840.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
CIgra06G0004870.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
CIgra06G0004880.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
CIgra06G0005910.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
CIgra06G0005920.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
CIgra06G0005960.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
CIgra06G0006410.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
CIgra07G0000950.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
CIgra07G0002640.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
CIgra07G0007510.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
CIgra07G0007520.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
CIgra08G0021000.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
CIgra08G0021290.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
CIgra08G0021370.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
CIgra08G0022740.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
CIgra08G0023740.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
CIgra08G0024780.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH