PlantSME Plant secondary metabolism enzyme database

Citrus grandis (citrus_grandis)

Imported from atlas release summary for Citrus grandis.

2318
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 687 19 BAHD (281) View species results
Alkaloid pathway 590 26 GES (105) View species results
Phenylpropanoid pathway 388 11 POD (171) View species results
Flavonoid pathway 262 8 UFGT (152) View species results
Rosmarinic acid pathway 222 7 C4H (80) View species results
Steroid pathway 169 13 CAS (107) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2050 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 458 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
CIgra01G0004140.1 Alkaloid IO low borderline
CIgra01G0004140.2 Alkaloid IO low borderline
CIgra01G0004140.3 Alkaloid IO low borderline
CIgra01G0024350.1 Alkaloid IO medium borderline
CIgra01G0027410.1 Alkaloid IO low borderline
CIgra01G0027430.1 Alkaloid IO low borderline
CIgra01G0027480.1 Alkaloid IO low borderline
CIgra02G0000350.2 Alkaloid IO low borderline
CIgra02G0007380.1 Alkaloid IO low borderline
CIgra02G0025550.1 Alkaloid IO medium borderline
CIgra02G0025580.1 Alkaloid IO medium borderline
CIgra02G0026700.1 Alkaloid IO medium borderline
CIgra02G0026850.2 Alkaloid IO low borderline
CIgra02G0035420.1 Alkaloid IO medium borderline
CIgra03G0008070.1 Alkaloid IO medium borderline
CIgra03G0008120.1 Alkaloid IO low borderline
CIgra03G0019210.1 Alkaloid IO medium borderline
CIgra05G0005820.1 Alkaloid IO medium borderline
CIgra05G0012650.1 Alkaloid IO medium borderline
CIgra05G0012660.1 Alkaloid IO medium borderline
CIgra05G0020920.1 Alkaloid IO medium borderline
CIgra05G0024710.1 Alkaloid IO medium borderline
CIgra05G0029460.1 Alkaloid IO medium borderline
CIgra05G0040280.1 Alkaloid IO medium borderline
CIgra06G0007870.1 Alkaloid IO medium borderline
CIgra06G0016410.1 Alkaloid IO medium borderline
CIgra06G0016420.1 Alkaloid IO medium borderline
CIgra06G0016430.1 Alkaloid IO medium borderline
CIgra06G0020570.2 Alkaloid IO low borderline
CIgra07G0001890.1 Alkaloid IO low borderline
CIgra07G0003570.1 Alkaloid IO medium borderline
CIgra07G0003570.2 Alkaloid IO medium borderline
CIgra07G0003600.1 Alkaloid IO medium borderline
CIgra07G0003630.1 Alkaloid IO medium borderline
CIgra07G0017070.1 Alkaloid IO medium borderline
CIgra08G0006040.1 Alkaloid IO low borderline
CIgra09G0024810.1 Alkaloid IO medium borderline
CIgraUnG0003800.1 Alkaloid IO medium pass