PlantSME Plant secondary metabolism enzyme database

Citrus grandis (citrus_grandis)

Imported from atlas release summary for Citrus grandis.

2318
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 687 19 BAHD (281) View species results
Alkaloid pathway 590 26 GES (105) View species results
Phenylpropanoid pathway 388 11 POD (171) View species results
Flavonoid pathway 262 8 UFGT (152) View species results
Rosmarinic acid pathway 222 7 C4H (80) View species results
Steroid pathway 169 13 CAS (107) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2050 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 458 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GGPPS
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Gene Pathway Family Confidence Status Best Target
CIgra01G0003650.1 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
CIgra02G0039800.1 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
CIgra02G0039800.2 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
CIgra02G0039800.3 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
CIgra02G0039800.4 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
CIgra02G0039800.5 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
CIgra02G0039800.6 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
CIgra02G0039800.7 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
CIgra02G0039800.8 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
CIgra02G0039800.9 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
CIgra02G0039810.1 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
CIgra02G0039810.2 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
CIgra02G0039810.3 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
CIgra03G0002430.1 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
CIgra03G0002480.1 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
CIgra03G0002520.1 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
CIgra03G0002530.1 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
CIgra05G0015770.1 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
CIgra06G0018360.1 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
CIgra06G0018370.1 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
CIgra06G0018380.1 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
CIgra06G0018390.1 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
CIgra08G0001120.1 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
CIgra08G0009710.1 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
CIgra08G0009770.1 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
CIgraUnG0009630.1 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
CIgraUnG0010560.1 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
CIgraUnG0010670.1 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
CIgraUnG0014980.1 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH