PlantSME Plant secondary metabolism enzyme database

Citrus grandis (citrus_grandis)

Imported from atlas release summary for Citrus grandis.

2318
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 687 19 BAHD (281) View species results
Alkaloid pathway 590 26 GES (105) View species results
Phenylpropanoid pathway 388 11 POD (171) View species results
Flavonoid pathway 262 8 UFGT (152) View species results
Rosmarinic acid pathway 222 7 C4H (80) View species results
Steroid pathway 169 13 CAS (107) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2050 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 458 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
CIgra03G0010210.4 Flavonoid F3H medium borderline
CIgra03G0010210.5 Flavonoid F3H medium borderline
CIgra03G0010210.6 Flavonoid F3H medium borderline
CIgra03G0010210.7 Flavonoid F3H medium borderline
CIgra03G0010210.8 Flavonoid F3H medium borderline
CIgra03G0014490.1 Flavonoid F3H medium borderline
CIgra03G0016110.1 Flavonoid F3H medium borderline
CIgra03G0017030.1 Flavonoid F3H medium borderline
CIgra03G0017400.1 Flavonoid F3H medium pass
CIgra04G0003120.1 Flavonoid F3H low borderline
CIgra04G0003140.1 Flavonoid F3H medium borderline
CIgra04G0008100.1 Flavonoid F3H medium borderline
CIgra04G0009330.1 Flavonoid F3H medium borderline
CIgra04G0014530.1 Flavonoid F3H medium borderline
CIgra04G0019330.1 Flavonoid F3H medium borderline
CIgra04G0019330.2 Flavonoid F3H medium borderline
CIgra04G0019780.1 Flavonoid F3H medium borderline
CIgra04G0019800.1 Flavonoid F3H medium borderline
CIgra04G0021380.1 Flavonoid F3H low borderline
CIgra05G0002650.1 Flavonoid F3H low borderline
CIgra05G0007880.1 Flavonoid F3H low borderline
CIgra05G0007880.2 Flavonoid F3H low borderline
CIgra05G0007880.3 Flavonoid F3H low borderline
CIgra05G0007880.4 Flavonoid F3H low borderline
CIgra05G0007880.5 Flavonoid F3H low borderline
CIgra05G0009430.1 Flavonoid F3H medium borderline
CIgra05G0014990.1 Flavonoid F3H medium borderline
CIgra05G0014990.2 Flavonoid F3H medium borderline
CIgra05G0015580.1 Flavonoid F3H medium pass
CIgra05G0015590.1 Flavonoid F3H medium borderline
CIgra05G0015600.1 Flavonoid F3H medium borderline
CIgra05G0015600.2 Flavonoid F3H medium borderline
CIgra05G0015600.3 Flavonoid F3H medium borderline
CIgra05G0015600.4 Flavonoid F3H medium borderline
CIgra05G0015600.5 Flavonoid F3H medium borderline
CIgra05G0015600.6 Flavonoid F3H medium borderline
CIgra05G0015600.7 Flavonoid F3H medium borderline
CIgra05G0015610.1 Flavonoid F3H medium borderline
CIgra05G0015630.1 Flavonoid F3H medium borderline
CIgra05G0015640.1 Flavonoid F3H medium borderline
CIgra05G0015650.1 Flavonoid F3H medium borderline
CIgra05G0015650.2 Flavonoid F3H medium borderline
CIgra05G0016200.1 Flavonoid F3H medium borderline
CIgra05G0017650.1 Flavonoid F3H medium borderline
CIgra05G0017670.1 Flavonoid F3H medium borderline
CIgra05G0019730.1 Flavonoid F3H medium borderline
CIgra05G0024090.1 Flavonoid F3H low borderline
CIgra05G0034120.1 Flavonoid F3H medium borderline
CIgra05G0039900.1 Flavonoid F3H medium borderline
CIgra05G0042980.1 Flavonoid F3H medium borderline