PlantSME Plant secondary metabolism enzyme database

Citrus grandis (citrus_grandis)

Imported from atlas release summary for Citrus grandis.

2318
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 687 19 BAHD (281) View species results
Alkaloid pathway 590 26 GES (105) View species results
Phenylpropanoid pathway 388 11 POD (171) View species results
Flavonoid pathway 262 8 UFGT (152) View species results
Rosmarinic acid pathway 222 7 C4H (80) View species results
Steroid pathway 169 13 CAS (107) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2050 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 458 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
CIgra06G0000980.1 Flavonoid F3H medium borderline
CIgra06G0001540.1 Flavonoid F3H low borderline
CIgra06G0004950.1 Flavonoid F3H medium borderline
CIgra06G0007020.1 Flavonoid F3H medium borderline
CIgra06G0012340.1 Flavonoid F3H medium borderline
CIgra07G0000810.1 Flavonoid F3H medium borderline
CIgra07G0001110.1 Flavonoid F3H medium borderline
CIgra07G0002040.1 Flavonoid F3H medium borderline
CIgra07G0013330.1 Flavonoid F3H medium borderline
CIgra07G0015500.1 Flavonoid F3H medium borderline
CIgra07G0015680.1 Flavonoid F3H medium borderline
CIgra07G0023770.1 Flavonoid F3H medium borderline
CIgra07G0023770.2 Flavonoid F3H medium borderline
CIgra08G0002890.1 Flavonoid F3H medium borderline
CIgra08G0005510.1 Flavonoid F3H medium borderline
CIgra08G0005530.1 Flavonoid F3H medium borderline
CIgra08G0005540.1 Flavonoid F3H medium borderline
CIgra08G0005550.1 Flavonoid F3H medium borderline
CIgra08G0005550.2 Flavonoid F3H medium borderline
CIgra08G0010340.1 Flavonoid F3H medium borderline
CIgra08G0010350.1 Flavonoid F3H medium borderline
CIgra08G0024300.1 Flavonoid F3H low borderline
CIgra09G0000760.1 Flavonoid F3H medium borderline
CIgra09G0003190.1 Flavonoid F3H medium borderline
CIgra09G0007730.1 Flavonoid F3H medium borderline
CIgra09G0007760.1 Flavonoid F3H low borderline
CIgra09G0007780.1 Flavonoid F3H medium borderline
CIgra09G0007790.1 Flavonoid F3H medium borderline
CIgra09G0007810.1 Flavonoid F3H medium borderline
CIgra09G0007820.1 Flavonoid F3H medium borderline
CIgra09G0008990.1 Flavonoid F3H medium borderline
CIgra09G0009460.1 Flavonoid F3H medium borderline
CIgra09G0010500.1 Flavonoid F3H medium borderline
CIgra09G0010520.1 Flavonoid F3H medium borderline
CIgra09G0010570.1 Flavonoid F3H low borderline
CIgra09G0010590.1 Flavonoid F3H low borderline
CIgra09G0010680.1 Flavonoid F3H medium borderline
CIgra09G0010680.2 Flavonoid F3H medium borderline
CIgra09G0012440.1 Flavonoid F3H medium borderline
CIgra09G0012440.2 Flavonoid F3H medium borderline
CIgra09G0012510.1 Flavonoid F3H medium borderline
CIgra09G0012510.2 Flavonoid F3H medium borderline
CIgra09G0022660.1 Flavonoid F3H medium borderline
CIgra09G0022680.1 Flavonoid F3H medium borderline
CIgra09G0023410.1 Flavonoid F3H medium pass
CIgra09G0025060.1 Flavonoid F3H medium borderline
CIgra09G0026010.1 Flavonoid F3H medium borderline
CIgra09G0028760.1 Flavonoid F3H medium borderline
CIgra09G0028770.1 Flavonoid F3H medium borderline
CIgraUnG0000610.1 Flavonoid F3H medium borderline