PlantSME Plant secondary metabolism enzyme database

Citrus grandis (citrus_grandis)

Imported from atlas release summary for Citrus grandis.

2318
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 687 19 BAHD (281) View species results
Alkaloid pathway 590 26 GES (105) View species results
Phenylpropanoid pathway 388 11 POD (171) View species results
Flavonoid pathway 262 8 UFGT (152) View species results
Rosmarinic acid pathway 222 7 C4H (80) View species results
Steroid pathway 169 13 CAS (107) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2050 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 458 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
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Gene Pathway Family Confidence Status Best Target
CIgra09G0003710.1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
CIgra09G0003720.1 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
CIgra09G0004910.1 Phenylpropanoid POD medium pass POD__00023__sp_Q9M7T0_PRX2F_ARATH
CIgra09G0006400.1 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
CIgra09G0006400.2 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
CIgra09G0010990.1 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
CIgra09G0010990.2 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
CIgra09G0010990.3 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
CIgra09G0011830.1 Phenylpropanoid POD medium pass POD__00003__sp_A9PCL4_PRX2_POPTR
CIgra09G0012180.1 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
CIgra09G0012190.1 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
CIgra09G0012190.2 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
CIgra09G0012200.1 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
CIgra09G0012200.2 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
CIgra09G0012200.3 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
CIgra09G0012200.4 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
CIgra09G0012200.5 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
CIgra09G0012200.6 Phenylpropanoid POD low borderline POD__00019__sp_Q949Y3_PPA26_ARATH
CIgra09G0024270.1 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
CIgra09G0024320.1 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
CIgra09G0024330.1 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
CIgra09G0024340.1 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
CIgra09G0024350.1 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
CIgra09G0026080.1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
CIgra09G0029580.1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
CIgraUnG0005080.1 Phenylpropanoid POD medium pass POD__00003__sp_A9PCL4_PRX2_POPTR
CIgraUnG0005330.1 Phenylpropanoid POD medium pass POD__00003__sp_A9PCL4_PRX2_POPTR
CIgraUnG0018660.1 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE