PlantSME Plant secondary metabolism enzyme database

Citrus grandis (citrus_grandis)

Imported from atlas release summary for Citrus grandis.

2318
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 687 19 BAHD (281) View species results
Alkaloid pathway 590 26 GES (105) View species results
Phenylpropanoid pathway 388 11 POD (171) View species results
Flavonoid pathway 262 8 UFGT (152) View species results
Rosmarinic acid pathway 222 7 C4H (80) View species results
Steroid pathway 169 13 CAS (107) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2050 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 458 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
CIgra02G0026850.1 Alkaloid T3O medium pass
CIgra02G0026870.1 Alkaloid T3O medium borderline
CIgra02G0032680.1 Alkaloid T3O medium borderline
CIgra02G0032990.1 Alkaloid T3O medium borderline
CIgra02G0033030.1 Alkaloid T3O medium borderline
CIgra02G0033030.2 Alkaloid T3O medium borderline
CIgra02G0033280.1 Alkaloid T3O medium borderline
CIgra02G0033310.1 Alkaloid T3O medium borderline
CIgra02G0040110.1 Alkaloid T3O medium pass
CIgra02G0040130.1 Alkaloid T3O medium pass
CIgra02G0044740.1 Alkaloid T3O medium pass
CIgra02G0046280.1 Alkaloid T3O medium borderline
CIgra03G0001470.1 Alkaloid T3O medium borderline
CIgra03G0001480.1 Alkaloid T3O medium borderline
CIgra03G0002160.1 Alkaloid T3O medium borderline
CIgra03G0004680.1 Alkaloid T3O medium borderline
CIgra03G0005190.1 Alkaloid T3O medium borderline
CIgra03G0008030.1 Alkaloid T3O medium borderline
CIgra03G0008080.1 Alkaloid T3O medium borderline
CIgra03G0008470.1 Alkaloid T3O medium borderline
CIgra03G0009000.1 Alkaloid T3O medium borderline
CIgra03G0017910.1 Alkaloid T3O medium pass
CIgra03G0018560.1 Alkaloid T3O medium borderline
CIgra03G0018580.1 Alkaloid T3O medium borderline
CIgra03G0022000.1 Alkaloid T3O medium borderline
CIgra03G0022010.1 Alkaloid T3O medium borderline
CIgra03G0022060.1 Alkaloid T3O low borderline
CIgra03G0023700.1 Alkaloid T3O medium borderline
CIgra04G0007220.1 Alkaloid T3O low borderline
CIgra04G0009160.1 Alkaloid T3O medium borderline
CIgra04G0011200.1 Alkaloid T3O medium borderline
CIgra04G0013390.1 Alkaloid T3O medium borderline
CIgra04G0013410.1 Alkaloid T3O medium borderline
CIgra04G0013420.1 Alkaloid T3O medium borderline
CIgra04G0013430.1 Alkaloid T3O medium borderline
CIgra04G0013440.1 Alkaloid T3O medium borderline
CIgra04G0013460.1 Alkaloid T3O medium borderline
CIgra04G0013490.1 Alkaloid T3O medium borderline
CIgra04G0013500.1 Alkaloid T3O medium borderline
CIgra04G0015240.1 Alkaloid T3O medium borderline
CIgra04G0017530.1 Alkaloid T3O medium borderline
CIgra05G0000520.1 Alkaloid T3O medium pass
CIgra05G0005830.1 Alkaloid T3O medium borderline
CIgra05G0005860.1 Alkaloid T3O medium borderline
CIgra05G0005900.1 Alkaloid T3O medium borderline
CIgra05G0005930.1 Alkaloid T3O medium borderline
CIgra05G0005950.1 Alkaloid T3O medium borderline
CIgra05G0006830.1 Alkaloid T3O low borderline
CIgra05G0008870.1 Alkaloid T3O medium borderline
CIgra05G0008880.1 Alkaloid T3O medium borderline