PlantSME Plant secondary metabolism enzyme database

Citrus grandis (citrus_grandis)

Imported from atlas release summary for Citrus grandis.

2318
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 687 19 BAHD (281) View species results
Alkaloid pathway 590 26 GES (105) View species results
Phenylpropanoid pathway 388 11 POD (171) View species results
Flavonoid pathway 262 8 UFGT (152) View species results
Rosmarinic acid pathway 222 7 C4H (80) View species results
Steroid pathway 169 13 CAS (107) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2050 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 458 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
CIgra05G0008890.1 Alkaloid T3O medium borderline
CIgra05G0009290.1 Alkaloid T3O medium borderline
CIgra05G0009310.1 Alkaloid T3O medium borderline
CIgra05G0009320.1 Alkaloid T3O medium borderline
CIgra05G0011190.1 Alkaloid T3O medium borderline
CIgra05G0011190.2 Alkaloid T3O medium borderline
CIgra05G0011650.1 Alkaloid T3O medium borderline
CIgra05G0012600.1 Alkaloid T3O medium borderline
CIgra05G0015010.1 Alkaloid T3O medium borderline
CIgra05G0021980.1 Alkaloid T3O medium borderline
CIgra05G0022350.1 Alkaloid T3O medium borderline
CIgra05G0022380.1 Alkaloid T3O medium borderline
CIgra05G0022390.1 Alkaloid T3O medium borderline
CIgra05G0023630.1 Alkaloid T3O medium borderline
CIgra05G0026450.1 Alkaloid T3O medium borderline
CIgra05G0027390.1 Alkaloid T3O medium pass
CIgra05G0027670.1 Alkaloid T3O medium pass
CIgra05G0027670.2 Alkaloid T3O medium pass
CIgra05G0028510.1 Alkaloid T3O medium borderline
CIgra05G0029470.1 Alkaloid T3O medium borderline
CIgra05G0029480.1 Alkaloid T3O medium borderline
CIgra05G0030310.1 Alkaloid T3O medium borderline
CIgra05G0030330.1 Alkaloid T3O medium borderline
CIgra05G0030380.1 Alkaloid T3O medium borderline
CIgra05G0030380.2 Alkaloid T3O medium borderline
CIgra05G0030380.3 Alkaloid T3O medium borderline
CIgra05G0030400.1 Alkaloid T3O medium borderline
CIgra05G0032090.1 Alkaloid T3O medium borderline
CIgra05G0032100.1 Alkaloid T3O medium borderline
CIgra05G0040630.1 Alkaloid T3O medium borderline
CIgra05G0044960.1 Alkaloid T3O medium pass
CIgra05G0044960.2 Alkaloid T3O medium pass
CIgra06G0001440.1 Alkaloid T3O low borderline
CIgra06G0015950.1 Alkaloid T3O medium pass
CIgra06G0017470.1 Alkaloid T3O medium borderline
CIgra06G0017520.1 Alkaloid T3O low borderline
CIgra06G0017540.1 Alkaloid T3O low borderline
CIgra06G0020290.1 Alkaloid T3O medium pass
CIgra06G0020570.1 Alkaloid T3O medium pass
CIgra07G0007890.1 Alkaloid T3O medium borderline
CIgra07G0012080.1 Alkaloid T3O medium borderline
CIgra07G0012090.1 Alkaloid T3O medium borderline
CIgra07G0012100.1 Alkaloid T3O medium borderline
CIgra07G0012110.1 Alkaloid T3O medium borderline
CIgra07G0012120.1 Alkaloid T3O medium borderline
CIgra07G0016110.1 Alkaloid T3O medium pass
CIgra07G0016460.1 Alkaloid T3O medium borderline
CIgra07G0017180.1 Alkaloid T3O medium borderline
CIgra07G0017190.1 Alkaloid T3O medium borderline
CIgra07G0017790.1 Alkaloid T3O medium borderline