PlantSME Plant secondary metabolism enzyme database

Citrus grandis (citrus_grandis)

Imported from atlas release summary for Citrus grandis.

2318
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 687 19 BAHD (281) View species results
Alkaloid pathway 590 26 GES (105) View species results
Phenylpropanoid pathway 388 11 POD (171) View species results
Flavonoid pathway 262 8 UFGT (152) View species results
Rosmarinic acid pathway 222 7 C4H (80) View species results
Steroid pathway 169 13 CAS (107) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2050 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 458 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
CIgra07G0018210.1 Alkaloid T3O medium pass
CIgra07G0018290.1 Alkaloid T3O medium borderline
CIgra07G0018300.1 Alkaloid T3O medium borderline
CIgra08G0004580.1 Alkaloid T3O medium pass
CIgra08G0004580.2 Alkaloid T3O low borderline
CIgra08G0005770.1 Alkaloid T3O medium borderline
CIgra08G0005800.1 Alkaloid T3O medium borderline
CIgra08G0005810.1 Alkaloid T3O medium borderline
CIgra08G0008620.1 Alkaloid T3O medium borderline
CIgra08G0017760.1 Alkaloid T3O medium pass
CIgra08G0017790.1 Alkaloid T3O medium pass
CIgra08G0022720.1 Alkaloid T3O medium pass
CIgra08G0022720.2 Alkaloid T3O medium pass
CIgra09G0018640.1 Alkaloid T3O medium borderline
CIgra09G0019760.1 Alkaloid T3O medium borderline
CIgra09G0022430.1 Alkaloid T3O medium borderline
CIgra09G0022460.1 Alkaloid T3O medium borderline
CIgra09G0022510.1 Alkaloid T3O medium borderline
CIgra09G0025410.1 Alkaloid T3O medium borderline
CIgra09G0025440.1 Alkaloid T3O medium borderline
CIgra09G0025450.1 Alkaloid T3O medium borderline
CIgra09G0025450.2 Alkaloid T3O medium borderline
CIgraUnG0000240.1 Alkaloid T3O medium pass
CIgraUnG0000250.1 Alkaloid T3O medium pass
CIgraUnG0003780.1 Alkaloid T3O medium borderline
CIgraUnG0003810.1 Alkaloid T3O medium borderline
CIgraUnG0004340.1 Alkaloid T3O medium borderline
CIgraUnG0004470.1 Alkaloid T3O medium borderline
CIgraUnG0004640.1 Alkaloid T3O medium borderline
CIgraUnG0004740.1 Alkaloid T3O medium borderline
CIgraUnG0005580.1 Alkaloid T3O medium borderline
CIgraUnG0017710.1 Alkaloid T3O low borderline