PlantSME Plant secondary metabolism enzyme database

Citrus grandis (citrus_grandis)

Imported from atlas release summary for Citrus grandis.

2318
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 687 19 BAHD (281) View species results
Alkaloid pathway 590 26 GES (105) View species results
Phenylpropanoid pathway 388 11 POD (171) View species results
Flavonoid pathway 262 8 UFGT (152) View species results
Rosmarinic acid pathway 222 7 C4H (80) View species results
Steroid pathway 169 13 CAS (107) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2050 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 458 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
CIgra08G0018230.1 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
CIgra08G0018240.1 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
CIgra09G0012100.1 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
CIgra09G0012400.1 Terpenoid TPS medium pass TPS__00168__sp_Q94JS8_FARS_CITJU
CIgra09G0015880.1 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
CIgra09G0015880.2 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
CIgra09G0015880.3 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
CIgra09G0029130.1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
CIgraUnG0013000.1 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
CIgraUnG0018350.1 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
CIgraUnG0018370.1 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
CIgraUnG0018850.1 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
CIgraUnG0019530.1 Terpenoid TPS medium pass TPS__00076__sp_D0UZK2_TPS1_CITSI
CIgraUnG0020250.1 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
CIgraUnG0020380.1 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO