PlantSME Plant secondary metabolism enzyme database

Citrus grandis (citrus_grandis)

Imported from atlas release summary for Citrus grandis.

2719
Candidate Protein Records
2318
Pathway-Level Records
5632
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 687 19 BAHD (281) View species results
Alkaloid pathway 590 26 GES (105) View species results
Phenylpropanoid pathway 388 11 POD (171) View species results
Flavonoid pathway 262 8 UFGT (152) View species results
Rosmarinic acid pathway 222 7 C4H (80) View species results
Steroid pathway 169 13 CAS (107) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2050 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 458 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
CIgra03G0002490.1 Terpenoid FPPS medium borderline
CIgra03G0002540.1 Terpenoid FPPS medium borderline
CIgra04G0014160.1 Terpenoid FPPS medium pass
CIgra05G0034140.1 Terpenoid FPPS medium pass
CIgra06G0006870.1 Terpenoid FPPS medium pass
CIgra06G0018160.1 Terpenoid FPPS medium borderline
CIgra06G0018320.1 Terpenoid FPPS medium borderline
CIgra08G0009730.1 Terpenoid FPPS medium borderline
CIgra08G0009740.1 Terpenoid FPPS medium borderline
CIgra08G0020530.1 Terpenoid FPPS medium pass
CIgra08G0024010.1 Terpenoid FPPS medium pass
CIgra09G0016050.1 Terpenoid FPPS medium pass
CIgraUnG0014990.1 Terpenoid FPPS medium borderline
CIgra01G0003650.1 Terpenoid GGPPS medium borderline
CIgra02G0039800.1 Terpenoid GGPPS medium borderline
CIgra02G0039800.2 Terpenoid GGPPS medium borderline
CIgra02G0039800.3 Terpenoid GGPPS medium borderline
CIgra02G0039800.4 Terpenoid GGPPS medium borderline
CIgra02G0039800.5 Terpenoid GGPPS medium borderline
CIgra02G0039800.6 Terpenoid GGPPS medium borderline
CIgra02G0039800.7 Terpenoid GGPPS medium borderline
CIgra02G0039800.8 Terpenoid GGPPS medium borderline
CIgra02G0039800.9 Terpenoid GGPPS medium borderline
CIgra02G0039810.1 Terpenoid GGPPS medium borderline
CIgra02G0039810.2 Terpenoid GGPPS medium borderline
CIgra02G0039810.3 Terpenoid GGPPS medium borderline
CIgra03G0002430.1 Terpenoid GGPPS medium borderline
CIgra03G0002480.1 Terpenoid GGPPS medium borderline
CIgra03G0002520.1 Terpenoid GGPPS medium borderline
CIgra03G0002530.1 Terpenoid GGPPS medium borderline
CIgra05G0015770.1 Terpenoid GGPPS medium borderline
CIgra06G0018360.1 Terpenoid GGPPS medium borderline
CIgra06G0018370.1 Terpenoid GGPPS medium borderline
CIgra06G0018380.1 Terpenoid GGPPS medium borderline
CIgra06G0018390.1 Terpenoid GGPPS medium borderline
CIgra08G0001120.1 Terpenoid GGPPS medium borderline
CIgra08G0009710.1 Terpenoid GGPPS medium borderline
CIgra08G0009770.1 Terpenoid GGPPS medium borderline
CIgraUnG0009630.1 Terpenoid GGPPS medium borderline
CIgraUnG0010560.1 Terpenoid GGPPS medium borderline
CIgraUnG0010670.1 Terpenoid GGPPS medium borderline
CIgraUnG0014980.1 Terpenoid GGPPS medium borderline
CIgra08G0001150.1 Terpenoid GPPS low borderline
CIgra08G0006150.1 Terpenoid HDR/IspH high pass
CIgra08G0006150.2 Terpenoid HDR/IspH high pass
CIgra08G0006150.3 Terpenoid HDR/IspH high pass
CIgra08G0020410.1 Terpenoid HDS/IspG high pass
CIgra03G0025800.1 Terpenoid HMGR medium pass
CIgra08G0000160.1 Terpenoid HMGR medium pass
CIgra08G0000160.2 Terpenoid HMGR medium pass