PlantSME Plant secondary metabolism enzyme database

Citrus grandis (citrus_grandis)

Imported from atlas release summary for Citrus grandis.

2719
Candidate Protein Records
2318
Pathway-Level Records
5632
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 687 19 BAHD (281) View species results
Alkaloid pathway 590 26 GES (105) View species results
Phenylpropanoid pathway 388 11 POD (171) View species results
Flavonoid pathway 262 8 UFGT (152) View species results
Rosmarinic acid pathway 222 7 C4H (80) View species results
Steroid pathway 169 13 CAS (107) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2050 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 458 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
CIgra09G0022580.3 Alkaloid NMT medium pass
CIgra09G0022580.4 Alkaloid NMT medium pass
CIgraUnG0005520.1 Alkaloid NMT medium pass
CIgraUnG0018520.1 Alkaloid NMT medium borderline
CIgraUnG0018520.2 Alkaloid NMT medium borderline
CIgraUnG0018520.3 Alkaloid NMT medium borderline
CIgraUnG0019230.1 Alkaloid NMT medium pass
CIgraUnG0019240.1 Alkaloid NMT medium borderline
CIgraUnG0020180.1 Alkaloid NMT medium pass
CIgra02G0035350.1 Alkaloid ODC medium pass
CIgra05G0026120.1 Alkaloid ODC medium pass
CIgra08G0023100.1 Alkaloid ODC low borderline
CIgra01G0015060.1 Alkaloid PMT low borderline
CIgra01G0015080.1 Alkaloid PMT low borderline
CIgra02G0004590.1 Alkaloid PMT low borderline
CIgra02G0004600.1 Alkaloid PMT medium pass
CIgra02G0004630.1 Alkaloid PMT medium pass
CIgra02G0004650.1 Alkaloid PMT low borderline
CIgra02G0004710.1 Alkaloid PMT medium pass
CIgra02G0004750.1 Alkaloid PMT low borderline
CIgra02G0004780.1 Alkaloid PMT medium pass
CIgra02G0010510.1 Alkaloid PMT low borderline
CIgra02G0020180.1 Alkaloid PMT low borderline
CIgra02G0025640.1 Alkaloid PMT low borderline
CIgra03G0023180.1 Alkaloid PMT low borderline
CIgra04G0018880.1 Alkaloid PMT medium pass
CIgra04G0023550.1 Alkaloid PMT medium pass
CIgra04G0023560.1 Alkaloid PMT low borderline
CIgra05G0004750.1 Alkaloid PMT medium borderline
CIgra05G0039220.1 Alkaloid PMT medium pass
CIgra06G0007760.1 Alkaloid PMT medium pass
CIgra07G0002230.1 Alkaloid PMT low borderline
CIgra07G0004370.1 Alkaloid PMT low borderline
CIgra07G0019560.1 Alkaloid PMT medium borderline
CIgra09G0005310.1 Alkaloid PMT medium pass
CIgra09G0028600.1 Alkaloid PMT medium borderline
CIgraUnG0006770.1 Alkaloid PMT medium pass
CIgraUnG0006800.1 Alkaloid PMT low borderline
CIgraUnG0006850.1 Alkaloid PMT low borderline
CIgra01G0019570.1 Alkaloid PYKS high pass
CIgra01G0027560.1 Alkaloid PYKS high pass
CIgra01G0027570.1 Alkaloid PYKS high pass
CIgra01G0027580.1 Alkaloid PYKS high pass
CIgra02G0009540.1 Alkaloid PYKS high pass
CIgra02G0021640.1 Alkaloid PYKS low borderline
CIgra02G0031360.1 Alkaloid PYKS low borderline
CIgra03G0004200.1 Alkaloid PYKS low borderline
CIgra03G0016180.1 Alkaloid PYKS high pass
CIgra03G0016190.1 Alkaloid PYKS high pass
CIgra03G0017240.1 Alkaloid PYKS high pass