Citrus grandis (citrus_grandis)
Imported from atlas release summary for Citrus grandis.
2719
Candidate Protein Records
2318
Pathway-Level Records
5632
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
5632
Family-Level Calls
BAHD
6.09%
C3'H/CYP98A
5.86%
C4H
5.74%
4CL
5.01%
IFS
3.94%
CYP76
3.78%
UGT
3.36%
NMT
3.25%
Other Families
62.98%
More Families (97)
T3O
182
3.23%
POD
178
3.16%
7DLGT
169
3.0%
UFGT
166
2.95%
F3H
153
2.72%
DWF4/CYP90B1
133
2.36%
CAS
132
2.34%
TPS
115
2.04%
GES
108
1.92%
CAD
107
1.9%
CODM/T6ODM
103
1.83%
BR6OX2/CYP85A2
98
1.74%
F3'H/CYP75B
95
1.69%
CYP71
82
1.46%
BBE
78
1.38%
SMT1/SMT2/SMT3
66
1.17%
TRI/TRII
63
1.12%
H6H
61
1.08%
HCT
61
1.08%
IFR
58
1.03%
CYP90D1
57
1.01%
STR
56
0.99%
RAS
54
0.96%
T16H
49
0.87%
GS
49
0.87%
TAT
48
0.85%
G8O/G8H
44
0.78%
ANR
43
0.76%
PYKS
40
0.71%
7DLH
39
0.69%
IO
38
0.67%
SGD
36
0.64%
LAMT
31
0.55%
CCR
31
0.55%
COMT
29
0.51%
GGPPS
29
0.51%
ISY
28
0.5%
F3'5'H/CYP75A
28
0.5%
CNMT
27
0.48%
PMT
27
0.48%
LAC
27
0.48%
CPD/CYP90A1
27
0.48%
FNS
24
0.43%
COR
23
0.41%
CPR
23
0.41%
AACT
22
0.39%
DFR
20
0.36%
NCS
19
0.34%
CHS
19
0.34%
CSE
19
0.34%
SLS
18
0.32%
8HGO
18
0.32%
PAL
18
0.32%
CYP51G1
18
0.32%
FPPS
16
0.28%
CHI
15
0.27%
F5H/CYP84A
14
0.25%
SQE
14
0.25%
TYDC_DDC
11
0.2%
MPO
11
0.2%
CCoAOMT
11
0.2%
BR6OX1/CYP85A1
11
0.2%
ROT3/CYP90C1
11
0.2%
CYP80B1
10
0.18%
HPPR
10
0.18%
DXS
10
0.18%
ANS/LDOX
9
0.16%
SQS/FDFT1
9
0.16%
DXR
9
0.16%
CYP719
8
0.14%
6OMT_4OMT_SOMT
7
0.12%
HMGS
7
0.12%
HYD1
6
0.11%
TDC
4
0.07%
ADC
4
0.07%
XMT_MXMT_DXMT
4
0.07%
FK
4
0.07%
MVD
4
0.07%
MVK
4
0.07%
MCT/IspD
4
0.07%
PMK
4
0.07%
HMGR
4
0.07%
ODC
3
0.05%
MDS/IspF
3
0.05%
HDR/IspH
3
0.05%
FLS
2
0.04%
CPI1
2
0.04%
SMO1/SMO2
2
0.04%
DWF7
2
0.04%
DET2
2
0.04%
16OMT
1
0.02%
DWF5
1
0.02%
DWF1
1
0.02%
CMK/IspE
1
0.02%
IDI
1
0.02%
GPPS
1
0.02%
HDS/IspG
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 687 | 19 | BAHD (281) | View species results |
| Alkaloid pathway | 590 | 26 | GES (105) | View species results |
| Phenylpropanoid pathway | 388 | 11 | POD (171) | View species results |
| Flavonoid pathway | 262 | 8 | UFGT (152) | View species results |
| Rosmarinic acid pathway | 222 | 7 | C4H (80) | View species results |
| Steroid pathway | 169 | 13 | CAS (107) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 2050 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 458 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| CIgra04G0010800.1 | Alkaloid | STR | medium | pass |
| CIgra04G0012010.1 | Alkaloid | STR | medium | pass |
| CIgra04G0014110.1 | Alkaloid | STR | low | borderline |
| CIgra04G0017600.1 | Alkaloid | STR | medium | pass |
| CIgra04G0017630.1 | Alkaloid | STR | low | borderline |
| CIgra05G0008240.1 | Alkaloid | STR | low | borderline |
| CIgra05G0018540.1 | Alkaloid | STR | low | borderline |
| CIgra05G0021160.1 | Alkaloid | STR | low | borderline |
| CIgra05G0021160.2 | Alkaloid | STR | low | borderline |
| CIgra05G0027730.1 | Alkaloid | STR | medium | pass |
| CIgra06G0003380.1 | Alkaloid | STR | medium | pass |
| CIgra06G0003470.1 | Alkaloid | STR | medium | pass |
| CIgra06G0003480.1 | Alkaloid | STR | low | borderline |
| CIgra06G0003490.1 | Alkaloid | STR | medium | pass |
| CIgra06G0013740.1 | Alkaloid | STR | low | borderline |
| CIgra06G0016050.1 | Alkaloid | STR | low | borderline |
| CIgra06G0016060.1 | Alkaloid | STR | low | borderline |
| CIgra06G0016070.1 | Alkaloid | STR | low | borderline |
| CIgra06G0020410.1 | Alkaloid | STR | low | borderline |
| CIgra07G0004250.1 | Alkaloid | STR | medium | pass |
| CIgra07G0005630.1 | Alkaloid | STR | medium | pass |
| CIgra07G0006900.1 | Alkaloid | STR | low | borderline |
| CIgra07G0015090.1 | Alkaloid | STR | low | borderline |
| CIgra07G0015310.1 | Alkaloid | STR | low | borderline |
| CIgra07G0015320.1 | Alkaloid | STR | medium | pass |
| CIgra08G0012180.1 | Alkaloid | STR | medium | pass |
| CIgra08G0019840.1 | Alkaloid | STR | low | borderline |
| CIgra09G0016330.1 | Alkaloid | STR | medium | pass |
| CIgra09G0016340.1 | Alkaloid | STR | medium | pass |
| CIgra09G0016350.1 | Alkaloid | STR | medium | pass |
| CIgra09G0016390.1 | Alkaloid | STR | low | borderline |
| CIgra09G0020330.1 | Alkaloid | STR | low | borderline |
| CIgra09G0020330.2 | Alkaloid | STR | low | borderline |
| CIgra09G0020360.1 | Alkaloid | STR | low | borderline |
| CIgra09G0027900.1 | Alkaloid | STR | medium | pass |
| CIgraUnG0001690.1 | Alkaloid | STR | medium | pass |
| CIgraUnG0004860.1 | Alkaloid | STR | low | borderline |
| CIgraUnG0004870.1 | Alkaloid | STR | low | borderline |
| CIgraUnG0018870.1 | Alkaloid | STR | medium | pass |
| CIgra01G0006010.1 | Alkaloid | T16H | low | borderline |
| CIgra01G0006030.1 | Alkaloid | T16H | medium | borderline |
| CIgra01G0024060.1 | Alkaloid | T16H | medium | borderline |
| CIgra01G0024360.1 | Alkaloid | T16H | medium | borderline |
| CIgra01G0027490.1 | Alkaloid | T16H | low | borderline |
| CIgra02G0005150.1 | Alkaloid | T16H | medium | borderline |
| CIgra02G0019010.1 | Alkaloid | T16H | low | borderline |
| CIgra02G0033300.1 | Alkaloid | T16H | medium | borderline |
| CIgra02G0040120.1 | Alkaloid | T16H | low | borderline |
| CIgra03G0000780.1 | Alkaloid | T16H | medium | borderline |
| CIgra03G0000790.1 | Alkaloid | T16H | medium | borderline |