PlantSME Plant secondary metabolism enzyme database

Citrus grandis (citrus_grandis)

Imported from atlas release summary for Citrus grandis.

2719
Candidate Protein Records
2318
Pathway-Level Records
5632
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 687 19 BAHD (281) View species results
Alkaloid pathway 590 26 GES (105) View species results
Phenylpropanoid pathway 388 11 POD (171) View species results
Flavonoid pathway 262 8 UFGT (152) View species results
Rosmarinic acid pathway 222 7 C4H (80) View species results
Steroid pathway 169 13 CAS (107) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2050 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 458 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
CIgra08G0022720.2 Alkaloid T3O medium pass
CIgra09G0018640.1 Alkaloid T3O medium borderline
CIgra09G0019760.1 Alkaloid T3O medium borderline
CIgra09G0022430.1 Alkaloid T3O medium borderline
CIgra09G0022460.1 Alkaloid T3O medium borderline
CIgra09G0022510.1 Alkaloid T3O medium borderline
CIgra09G0025410.1 Alkaloid T3O medium borderline
CIgra09G0025440.1 Alkaloid T3O medium borderline
CIgra09G0025450.1 Alkaloid T3O medium borderline
CIgra09G0025450.2 Alkaloid T3O medium borderline
CIgraUnG0000240.1 Alkaloid T3O medium pass
CIgraUnG0000250.1 Alkaloid T3O medium pass
CIgraUnG0003780.1 Alkaloid T3O medium borderline
CIgraUnG0003810.1 Alkaloid T3O medium borderline
CIgraUnG0004340.1 Alkaloid T3O medium borderline
CIgraUnG0004470.1 Alkaloid T3O medium borderline
CIgraUnG0004640.1 Alkaloid T3O medium borderline
CIgraUnG0004740.1 Alkaloid T3O medium borderline
CIgraUnG0005580.1 Alkaloid T3O medium borderline
CIgraUnG0017710.1 Alkaloid T3O low borderline
CIgra01G0026650.1 Alkaloid TDC medium borderline
CIgra03G0018250.1 Alkaloid TDC low borderline
CIgra03G0018250.2 Alkaloid TDC low borderline
CIgra05G0030600.1 Alkaloid TDC low borderline
CIgra01G0022340.1 Alkaloid TRI/TRII medium pass
CIgra01G0028640.1 Alkaloid TRI/TRII low borderline
CIgra02G0009830.1 Alkaloid TRI/TRII medium pass
CIgra02G0025860.1 Alkaloid TRI/TRII medium pass
CIgra02G0028510.1 Alkaloid TRI/TRII medium pass
CIgra02G0030960.1 Alkaloid TRI/TRII low borderline
CIgra02G0037510.1 Alkaloid TRI/TRII medium pass
CIgra02G0037510.2 Alkaloid TRI/TRII medium pass
CIgra02G0037510.3 Alkaloid TRI/TRII medium pass
CIgra02G0037510.4 Alkaloid TRI/TRII low borderline
CIgra02G0045780.1 Alkaloid TRI/TRII medium pass
CIgra02G0045790.1 Alkaloid TRI/TRII medium pass
CIgra04G0002820.1 Alkaloid TRI/TRII medium pass
CIgra05G0014070.1 Alkaloid TRI/TRII medium pass
CIgra05G0014070.2 Alkaloid TRI/TRII medium pass
CIgra05G0014070.3 Alkaloid TRI/TRII medium pass
CIgra05G0031020.1 Alkaloid TRI/TRII medium pass
CIgra05G0036560.1 Alkaloid TRI/TRII medium pass
CIgra05G0038970.1 Alkaloid TRI/TRII medium pass
CIgra05G0039050.1 Alkaloid TRI/TRII medium pass
CIgra05G0042420.1 Alkaloid TRI/TRII low borderline
CIgra05G0042420.2 Alkaloid TRI/TRII low borderline
CIgra06G0000410.1 Alkaloid TRI/TRII low borderline
CIgra06G0000410.2 Alkaloid TRI/TRII low borderline
CIgra06G0000410.3 Alkaloid TRI/TRII low borderline
CIgra06G0005100.1 Alkaloid TRI/TRII medium pass