PlantSME Plant secondary metabolism enzyme database

Citrus grandis (citrus_grandis)

Imported from atlas release summary for Citrus grandis.

2318
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 687 19 BAHD (281) View species results
Alkaloid pathway 590 26 GES (105) View species results
Phenylpropanoid pathway 388 11 POD (171) View species results
Flavonoid pathway 262 8 UFGT (152) View species results
Rosmarinic acid pathway 222 7 C4H (80) View species results
Steroid pathway 169 13 CAS (107) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2050 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 458 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
CIgra02G0038740.1 Alkaloid BBE medium borderline
CIgra02G0038750.1 Alkaloid BBE medium borderline
CIgra02G0038760.1 Alkaloid BBE medium borderline
CIgra02G0038770.1 Alkaloid BBE medium borderline
CIgra02G0038780.1 Alkaloid BBE medium borderline
CIgra02G0038790.1 Alkaloid BBE medium borderline
CIgra02G0038800.1 Alkaloid BBE medium borderline
CIgra02G0038810.1 Alkaloid BBE medium borderline
CIgra02G0038820.1 Alkaloid BBE medium borderline
CIgra02G0038830.1 Alkaloid BBE medium borderline
CIgra02G0038840.1 Alkaloid BBE medium borderline
CIgra02G0038850.1 Alkaloid BBE medium borderline
CIgra02G0038860.1 Alkaloid BBE medium borderline
CIgra02G0038880.1 Alkaloid BBE medium borderline
CIgra02G0038890.1 Alkaloid BBE medium borderline
CIgra02G0038900.1 Alkaloid BBE medium borderline
CIgra02G0038910.1 Alkaloid BBE medium borderline
CIgra02G0038920.1 Alkaloid BBE medium borderline
CIgra02G0038930.1 Alkaloid BBE medium borderline
CIgra02G0038950.1 Alkaloid BBE medium borderline
CIgra02G0038970.1 Alkaloid BBE medium borderline
CIgra02G0038980.1 Alkaloid BBE medium borderline
CIgra02G0038990.1 Alkaloid BBE medium borderline
CIgra03G0001130.1 Alkaloid BBE medium borderline
CIgra03G0001150.1 Alkaloid BBE medium borderline
CIgra03G0001150.2 Alkaloid BBE medium borderline
CIgra03G0001170.1 Alkaloid BBE medium borderline
CIgra03G0002420.1 Alkaloid BBE medium borderline
CIgra03G0003700.1 Alkaloid BBE medium borderline
CIgra03G0010240.1 Alkaloid BBE medium borderline
CIgra03G0010240.2 Alkaloid BBE medium borderline
CIgra04G0003850.1 Alkaloid BBE low borderline
CIgra04G0014720.1 Alkaloid BBE medium borderline
CIgra05G0012740.1 Alkaloid BBE medium borderline
CIgra05G0012750.1 Alkaloid BBE medium borderline
CIgra05G0023590.1 Alkaloid BBE medium borderline
CIgra06G0013630.1 Alkaloid BBE low borderline
CIgra06G0020600.1 Alkaloid BBE medium borderline
CIgra08G0005990.1 Alkaloid BBE low borderline
CIgra08G0005990.2 Alkaloid BBE low borderline
CIgra08G0005990.3 Alkaloid BBE low borderline
CIgra08G0005990.4 Alkaloid BBE low borderline
CIgra08G0009640.1 Alkaloid BBE medium borderline
CIgra08G0009700.1 Alkaloid BBE medium borderline
CIgra08G0017570.1 Alkaloid BBE medium borderline
CIgra08G0017580.1 Alkaloid BBE medium borderline
CIgra09G0023010.1 Alkaloid BBE medium borderline
CIgra09G0023020.1 Alkaloid BBE medium borderline
CIgra09G0023030.1 Alkaloid BBE medium borderline
CIgra09G0023040.1 Alkaloid BBE medium borderline