PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

2090
Candidate Protein Records
1667
Pathway-Level Records
4142
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
genome_Dca4330.1 Alkaloid NMT medium borderline
genome_Dca44040.1 Alkaloid NMT low borderline
genome_Dca4428.1 Alkaloid NMT medium pass
genome_Dca4429.1 Alkaloid NMT medium borderline
genome_Dca44313.1 Alkaloid NMT medium pass
genome_Dca44367.1 Alkaloid NMT low borderline
genome_Dca45806.1 Alkaloid NMT medium pass
genome_Dca46518.1 Alkaloid NMT medium pass
genome_Dca47039.1 Alkaloid NMT low borderline
genome_Dca47226.1 Alkaloid NMT medium pass
genome_Dca48056.1 Alkaloid NMT medium borderline
genome_Dca48057.1 Alkaloid NMT medium borderline
genome_Dca48557.1 Alkaloid NMT medium borderline
genome_Dca48558.1 Alkaloid NMT medium borderline
genome_Dca48559.1 Alkaloid NMT medium borderline
genome_Dca48561.1 Alkaloid NMT medium borderline
genome_Dca4927.1 Alkaloid NMT medium pass
genome_Dca50754.1 Alkaloid NMT medium pass
genome_Dca51110.1 Alkaloid NMT medium borderline
genome_Dca52271.1 Alkaloid NMT medium pass
genome_Dca52272.1 Alkaloid NMT medium borderline
genome_Dca52273.1 Alkaloid NMT medium pass
genome_Dca52303.1 Alkaloid NMT low borderline
genome_Dca52367.1 Alkaloid NMT medium pass
genome_Dca52395.1 Alkaloid NMT low borderline
genome_Dca54821.1 Alkaloid NMT low borderline
genome_Dca55423.1 Alkaloid NMT medium pass
genome_Dca56527.1 Alkaloid NMT medium borderline
genome_Dca56558.1 Alkaloid NMT medium pass
genome_Dca56801.1 Alkaloid NMT medium borderline
genome_Dca56801.2 Alkaloid NMT medium borderline
genome_Dca58554.1 Alkaloid NMT medium borderline
genome_Dca58880.1 Alkaloid NMT medium pass
genome_Dca59357.1 Alkaloid NMT medium pass
genome_Dca59873.1 Alkaloid NMT medium borderline
genome_Dca59923.1 Alkaloid NMT medium borderline
genome_Dca60237.1 Alkaloid NMT medium borderline
genome_Dca60773.1 Alkaloid NMT medium borderline
genome_Dca61028.1 Alkaloid NMT medium borderline
genome_Dca61606.1 Alkaloid NMT low borderline
genome_Dca6858.1 Alkaloid NMT medium pass
genome_Dca79.1 Alkaloid NMT low borderline
genome_Dca9555.1 Alkaloid NMT medium pass
genome_Dca9882.1 Alkaloid NMT medium pass
genome_Dca17292.1 Alkaloid PMT low borderline
genome_Dca26576.1 Alkaloid PMT medium borderline
genome_Dca26673.1 Alkaloid PMT medium borderline
genome_Dca32387.1 Alkaloid PMT medium pass
genome_Dca32388.1 Alkaloid PMT medium pass
genome_Dca35196.1 Alkaloid PMT medium borderline