PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

2090
Candidate Protein Records
1667
Pathway-Level Records
4142
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
genome_Dca39998.1 Alkaloid PMT medium borderline
genome_Dca41229.1 Alkaloid PMT medium pass
genome_Dca41408.1 Alkaloid PMT low borderline
genome_Dca42815.1 Alkaloid PMT low borderline
genome_Dca43723.1 Alkaloid PMT medium pass
genome_Dca43724.1 Alkaloid PMT medium pass
genome_Dca43726.1 Alkaloid PMT medium pass
genome_Dca43727.1 Alkaloid PMT medium pass
genome_Dca4546.1 Alkaloid PMT medium borderline
genome_Dca48099.1 Alkaloid PMT medium borderline
genome_Dca50416.1 Alkaloid PMT low borderline
genome_Dca51864.1 Alkaloid PMT medium borderline
genome_Dca52625.1 Alkaloid PMT low borderline
genome_Dca52779.1 Alkaloid PMT low borderline
genome_Dca53597.1 Alkaloid PMT low borderline
genome_Dca56525.1 Alkaloid PMT medium borderline
genome_Dca56526.1 Alkaloid PMT medium borderline
genome_Dca5668.1 Alkaloid PMT low borderline
genome_Dca61942.1 Alkaloid PMT medium pass
genome_Dca7129.1 Alkaloid PMT medium pass
genome_Dca7130.1 Alkaloid PMT medium pass
genome_Dca7133.1 Alkaloid PMT medium pass
genome_Dca9198.1 Alkaloid PMT low borderline
genome_Dca13528.1 Alkaloid PYKS low borderline
genome_Dca16810.1 Alkaloid PYKS low borderline
genome_Dca19097.1 Alkaloid PYKS high pass
genome_Dca19347.1 Alkaloid PYKS low borderline
genome_Dca20408.1 Alkaloid PYKS low borderline
genome_Dca22668.1 Alkaloid PYKS high pass
genome_Dca25232.1 Alkaloid PYKS low borderline
genome_Dca26150.1 Alkaloid PYKS low borderline
genome_Dca26151.1 Alkaloid PYKS low borderline
genome_Dca30445.1 Alkaloid PYKS low borderline
genome_Dca30447.1 Alkaloid PYKS low borderline
genome_Dca31819.1 Alkaloid PYKS low borderline
genome_Dca31961.1 Alkaloid PYKS low borderline
genome_Dca35510.1 Alkaloid PYKS low borderline
genome_Dca3769.1 Alkaloid PYKS high pass
genome_Dca3771.1 Alkaloid PYKS medium pass
genome_Dca3772.1 Alkaloid PYKS high pass
genome_Dca40854.1 Alkaloid PYKS low borderline
genome_Dca42651.1 Alkaloid PYKS low borderline
genome_Dca44843.1 Alkaloid PYKS low borderline
genome_Dca46394.1 Alkaloid PYKS low borderline
genome_Dca47755.1 Alkaloid PYKS low borderline
genome_Dca48711.1 Alkaloid PYKS high pass
genome_Dca50243.1 Alkaloid PYKS low borderline
genome_Dca51423.1 Alkaloid PYKS medium pass
genome_Dca57932.1 Alkaloid PYKS high pass
genome_Dca58876.1 Alkaloid PYKS high pass