PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

1667
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Gene Pathway Family Confidence Status
genome_Dca2103.1 Alkaloid 7DLGT low borderline
genome_Dca21899.1 Alkaloid 7DLGT high pass
genome_Dca22201.1 Alkaloid 7DLGT high pass
genome_Dca23349.1 Alkaloid 7DLGT low borderline
genome_Dca23374.1 Alkaloid 7DLGT low borderline
genome_Dca24195.1 Alkaloid 7DLGT low borderline
genome_Dca24781.1 Alkaloid 7DLGT low borderline
genome_Dca25145.1 Alkaloid 7DLGT medium pass
genome_Dca25148.1 Alkaloid 7DLGT low borderline
genome_Dca25217.1 Alkaloid 7DLGT low borderline
genome_Dca25218.1 Alkaloid 7DLGT medium pass
genome_Dca26600.1 Alkaloid 7DLGT low borderline
genome_Dca26949.1 Alkaloid 7DLGT low borderline
genome_Dca26985.1 Alkaloid 7DLGT medium pass
genome_Dca27315.1 Alkaloid 7DLGT high pass
genome_Dca27317.1 Alkaloid 7DLGT medium pass
genome_Dca27318.1 Alkaloid 7DLGT medium pass
genome_Dca27319.1 Alkaloid 7DLGT medium pass
genome_Dca28325.1 Alkaloid 7DLGT medium pass
genome_Dca28691.1 Alkaloid 7DLGT high pass
genome_Dca29071.1 Alkaloid 7DLGT medium pass
genome_Dca29072.1 Alkaloid 7DLGT high pass
genome_Dca29074.1 Alkaloid 7DLGT medium pass
genome_Dca29075.1 Alkaloid 7DLGT high pass
genome_Dca29076.1 Alkaloid 7DLGT high pass
genome_Dca29077.1 Alkaloid 7DLGT medium pass
genome_Dca29425.1 Alkaloid 7DLGT high pass
genome_Dca29485.1 Alkaloid 7DLGT low borderline
genome_Dca29486.1 Alkaloid 7DLGT low borderline
genome_Dca29487.1 Alkaloid 7DLGT low borderline
genome_Dca29488.1 Alkaloid 7DLGT low borderline
genome_Dca29617.1 Alkaloid 7DLGT medium pass
genome_Dca30270.1 Alkaloid 7DLGT medium pass
genome_Dca31720.1 Alkaloid 7DLGT low borderline
genome_Dca31722.1 Alkaloid 7DLGT low borderline
genome_Dca31723.1 Alkaloid 7DLGT low borderline
genome_Dca31854.1 Alkaloid 7DLGT medium pass
genome_Dca3205.1 Alkaloid 7DLGT low borderline
genome_Dca32424.1 Alkaloid 7DLGT low borderline
genome_Dca32426.1 Alkaloid 7DLGT medium pass
genome_Dca32668.1 Alkaloid 7DLGT medium pass
genome_Dca32669.1 Alkaloid 7DLGT medium pass
genome_Dca32670.1 Alkaloid 7DLGT medium pass
genome_Dca32671.1 Alkaloid 7DLGT medium pass
genome_Dca3285.1 Alkaloid 7DLGT low borderline
genome_Dca32886.1 Alkaloid 7DLGT low borderline
genome_Dca32887.1 Alkaloid 7DLGT low borderline
genome_Dca32900.1 Alkaloid 7DLGT low borderline
genome_Dca33307.1 Alkaloid 7DLGT high pass
genome_Dca33447.1 Alkaloid 7DLGT medium pass