PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

1667
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
genome_Dca37546.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca38663.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca40454.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca40459.1 Steroid BR6OX2/CYP85A2 medium borderline
genome_Dca40811.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca40812.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca41037.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca41038.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca41040.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca41155.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca41435.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca41451.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca42105.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca42748.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca44828.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca44828.2 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca47550.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca4763.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca48539.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca53919.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca54353.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca54404.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca5480.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca56371.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca56678.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca58572.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca58736.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca59031.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca59092.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca59110.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca59899.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca60402.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca60695.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca6112.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca61859.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca62445.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca62447.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca62449.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca68.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca7925.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca8641.1 Steroid BR6OX2/CYP85A2 low borderline
genome_Dca10024.1 Steroid CAS medium pass
genome_Dca116.1 Steroid CAS medium pass
genome_Dca11693.1 Steroid CAS medium pass
genome_Dca117.1 Steroid CAS medium pass
genome_Dca1636.1 Steroid CAS medium pass
genome_Dca1641.1 Steroid CAS medium pass
genome_Dca1643.1 Steroid CAS medium pass
genome_Dca18653.1 Steroid CAS low borderline
genome_Dca18654.1 Steroid CAS low borderline