PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

1667
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
genome_Dca18655.1 Steroid CAS low borderline
genome_Dca19377.1 Steroid CAS medium pass
genome_Dca19517.1 Steroid CAS low borderline
genome_Dca19518.1 Steroid CAS low borderline
genome_Dca19862.1 Steroid CAS low borderline
genome_Dca23764.1 Steroid CAS medium pass
genome_Dca28685.1 Steroid CAS low borderline
genome_Dca28874.1 Steroid CAS medium pass
genome_Dca32353.1 Steroid CAS medium pass
genome_Dca32881.1 Steroid CAS low borderline
genome_Dca36224.1 Steroid CAS low borderline
genome_Dca36226.1 Steroid CAS low borderline
genome_Dca36237.1 Steroid CAS medium pass
genome_Dca36703.1 Steroid CAS low borderline
genome_Dca36705.1 Steroid CAS low borderline
genome_Dca37007.1 Steroid CAS medium pass
genome_Dca37434.1 Steroid CAS low borderline
genome_Dca37435.1 Steroid CAS medium pass
genome_Dca38959.1 Steroid CAS low borderline
genome_Dca39938.1 Steroid CAS low borderline
genome_Dca42012.1 Steroid CAS medium pass
genome_Dca45349.1 Steroid CAS medium pass
genome_Dca50122.1 Steroid CAS low borderline
genome_Dca50123.1 Steroid CAS low borderline
genome_Dca50125.1 Steroid CAS low borderline
genome_Dca50126.1 Steroid CAS low borderline
genome_Dca50128.1 Steroid CAS low borderline
genome_Dca50129.1 Steroid CAS low borderline
genome_Dca50131.1 Steroid CAS medium pass
genome_Dca50132.1 Steroid CAS low borderline
genome_Dca51881.1 Steroid CAS medium pass
genome_Dca51914.1 Steroid CAS low borderline
genome_Dca51915.1 Steroid CAS low borderline
genome_Dca53748.1 Steroid CAS low borderline
genome_Dca54434.1 Steroid CAS medium pass
genome_Dca58806.1 Steroid CAS medium pass
genome_Dca58807.1 Steroid CAS medium pass
genome_Dca58923.1 Steroid CAS medium pass
genome_Dca60397.1 Steroid CAS medium pass
genome_Dca61410.1 Steroid CAS medium pass
genome_Dca61411.1 Steroid CAS medium pass
genome_Dca7802.1 Steroid CAS low borderline
genome_Dca13176.1 Steroid CPD/CYP90A1 medium borderline
genome_Dca16790.1 Steroid CPD/CYP90A1 low borderline
genome_Dca19138.1 Steroid CPD/CYP90A1 low borderline
genome_Dca24769.1 Steroid CPD/CYP90A1 medium borderline
genome_Dca27717.1 Steroid CPD/CYP90A1 medium borderline
genome_Dca29201.1 Steroid CPD/CYP90A1 medium borderline
genome_Dca35372.1 Steroid CPD/CYP90A1 medium borderline
genome_Dca52340.1 Steroid CPD/CYP90A1 medium borderline