PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

1667
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
genome_Dca35372.1 Rosmarinic Acid C4H low borderline
genome_Dca35452.1 Rosmarinic Acid C4H low borderline
genome_Dca37546.1 Rosmarinic Acid C4H low borderline
genome_Dca37553.1 Rosmarinic Acid C4H low borderline
genome_Dca37618.1 Rosmarinic Acid C4H low borderline
genome_Dca38049.1 Rosmarinic Acid C4H low borderline
genome_Dca38663.1 Rosmarinic Acid C4H low borderline
genome_Dca40459.1 Rosmarinic Acid C4H low borderline
genome_Dca40491.1 Rosmarinic Acid C4H low borderline
genome_Dca40811.1 Rosmarinic Acid C4H low borderline
genome_Dca40812.1 Rosmarinic Acid C4H low borderline
genome_Dca41037.1 Rosmarinic Acid C4H low borderline
genome_Dca41038.1 Rosmarinic Acid C4H low borderline
genome_Dca41040.1 Rosmarinic Acid C4H low borderline
genome_Dca41435.1 Rosmarinic Acid C4H low borderline
genome_Dca41451.1 Rosmarinic Acid C4H low borderline
genome_Dca41958.1 Rosmarinic Acid C4H low borderline
genome_Dca42105.1 Rosmarinic Acid C4H low borderline
genome_Dca42344.1 Rosmarinic Acid C4H low borderline
genome_Dca42414.1 Rosmarinic Acid C4H low borderline
genome_Dca42415.1 Rosmarinic Acid C4H low borderline
genome_Dca42416.1 Rosmarinic Acid C4H low borderline
genome_Dca42748.1 Rosmarinic Acid C4H medium pass
genome_Dca432.1 Rosmarinic Acid C4H low borderline
genome_Dca43524.1 Rosmarinic Acid C4H low borderline
genome_Dca43706.1 Rosmarinic Acid C4H medium pass
genome_Dca44550.1 Rosmarinic Acid C4H low borderline
genome_Dca44551.1 Rosmarinic Acid C4H low borderline
genome_Dca44828.1 Rosmarinic Acid C4H low borderline
genome_Dca44828.2 Rosmarinic Acid C4H low borderline
genome_Dca45331.1 Rosmarinic Acid C4H low borderline
genome_Dca45347.1 Rosmarinic Acid C4H medium pass
genome_Dca46954.1 Rosmarinic Acid C4H low borderline
genome_Dca47205.1 Rosmarinic Acid C4H low borderline
genome_Dca47550.1 Rosmarinic Acid C4H medium pass
genome_Dca4763.1 Rosmarinic Acid C4H low borderline
genome_Dca48125.1 Rosmarinic Acid C4H low borderline
genome_Dca49027.1 Rosmarinic Acid C4H low borderline
genome_Dca4951.1 Rosmarinic Acid C4H low borderline
genome_Dca49633.1 Rosmarinic Acid C4H low borderline
genome_Dca51994.1 Rosmarinic Acid C4H low borderline
genome_Dca52259.1 Rosmarinic Acid C4H low borderline
genome_Dca52260.1 Rosmarinic Acid C4H low borderline
genome_Dca53512.1 Rosmarinic Acid C4H low borderline
genome_Dca53918.1 Rosmarinic Acid C4H low borderline
genome_Dca53919.1 Rosmarinic Acid C4H medium pass
genome_Dca53920.1 Rosmarinic Acid C4H low borderline
genome_Dca53923.1 Rosmarinic Acid C4H low borderline
genome_Dca53924.1 Rosmarinic Acid C4H low borderline
genome_Dca53925.1 Rosmarinic Acid C4H low borderline